AARA010383 (Anopheles arabiensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 AARA010383 T147120_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Sp3
M08978_2.00
Mus musculus
NBBNVSCCCCKCCCMBBBNN

NNVVVKGGGMGGGGSBNVVN
Misc
Kulakovskiy et al.(2013)
SP3_MOUSE.H11MO.0.B
0.771 0.841
Sp1
M03682_2.00
Drosophila melanogaster
HNGCCACGCCCARK

MYTGGGCGTGGCND
SELEX
Nitta et al.(2015)
Sp1_1
0.768 0.841
Sp1
M06117_2.00
Drosophila melanogaster
DHYMCGCCCMY

RKGGGCGKRDH
B1H
Zhu et al.(2011)
Sp1_SANGER_5_FBgn0020378
0.768 0.841
Sp1
M06118_2.00
Drosophila melanogaster
NKHHMCGCCCMYNN

NNRKGGGCGKDDMN
B1H
Zhu et al.(2011)
Sp1_SOLEXA_2.5_FBgn0020378
0.768 0.841
Sp5
M09016_2.00
Mus musculus
CYCCKCCYHYHBCYYHBYYYHYHB

VDRDRRRVDRRGVDRDRGGMGGRG
Misc
Kulakovskiy et al.(2013)
SP5_MOUSE.H11MO.0.C
0.768 0.826
SP5
M10319_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP5_Q2
0.768 0.826
SP3
M02910_2.00
Homo sapiens
VCCMCRCCCMY

RKGGGYGKGGB
SELEX
Jolma et al.(2013)
SP3_1
0.767 0.826
SP3
M04558_2.00
Homo sapiens
NRCCACGCCCMYH

DRKGGGCGTGGYN
SELEX
Yin et al.(2017)
SP3_eDBD_HT-SELEX
0.767 0.826
SP3
M08920_2.00
Homo sapiens
NBBNVSCCCCKCCCMBBBNN

NNVVVKGGGMGGGGSBNVVN
Misc
Kulakovskiy et al.(2013)
SP3_HUMAN.H11MO.0.B
0.767 0.826
SP3
M10263_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP3_Q3_01
0.767 0.826
SP3
M10264_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP3_Q3
0.767 0.826
SP3
M04559_2.00
Homo sapiens
NRCCMCGCCCMCH

DGKGGGCGKGGYN
SELEX
Yin et al.(2017)
SP3_eDBD_Methyl-HT-SELEX
0.767 0.826
SP4
M02879_2.00
Homo sapiens
NWRGCCACGCCCMCHYN

NRDGKGGGCGTGGCYWN
SELEX
Jolma et al.(2013)
SP4_1
0.758 0.841
SP4
M08296_2.00
Homo sapiens
NNVGCYCCKCCYMYH

DRKRGGMGGRGCBNN
ChIP-seq
Schmitges et al.(2016)
Q02446.MEME
0.758 0.841
SP4
M08873_2.00
Homo sapiens
BYHDKCYCCGCCYYYHBSBB

VVSVDRRRGGCGGRGMHDRV
Misc
Kulakovskiy et al.(2013)
SP4_HUMAN.H11MO.0.A
0.758 0.841
SP4
M10165_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP4_Q3
0.758 0.841
SP4
M10166_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP4_Q5
0.758 0.841
Spps
M06159_2.00
Drosophila melanogaster
KWDRCCMCGCCCMBH

DVKGGGCGKGGYHWM
B1H
Zhu et al.(2011)
CG5669_SANGER_10_FBgn0039169
0.758 0.826
Spps
M06160_2.00
Drosophila melanogaster
BDDGCCMCGCCCMYN

NRKGGGCGKGGCHHV
B1H
Zhu et al.(2011)
CG5669_SOLEXA_5_FBgn0039169
0.758 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AARA010383-PA C2H2 ZF 124 148
AARA010383-PA C2H2 ZF 154 178
AARA010383-PA C2H2 ZF 184 206

Links

Other C2H2 ZF family TFs
Other Anopheles arabiensis TFs

Invalid Input OrderBy

385 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action