CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AATE009625
(
Anopheles atroparvus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
AATE009625
T147259_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ci
M03672_2.00
Drosophila melanogaster
NCGMCCACMN
NKGTGGKCGN
SELEX
Nitta et al.(2015)
ci_1
0.815
0.939
ci
M06084_2.00
Drosophila melanogaster
RGMCCACMCAC
GTGKGTGGKCY
B1H
Zhu et al.(2011)
Ci_SANGER_5_FBgn0004859
0.815
0.939
ci
M02644_2.00
Drosophila melanogaster
GACCACCCAMG
CKTGGGTGGTC
SELEX
Hallikas et al.(2006)
Ci
0.815
0.939
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AATE009625-PA
C2H2 ZF
497
522
TNCHWRECSLEFNTQDELVKHINNDH
AATE009625-PA
C2H2 ZF
530
557
FVCRWEDCSRDEKPFKAQYMLVVHMRRH
AATE009625-PA
C2H2 ZF
563
587
HKCTFEGCCKAYSRLENLKTHLRSH
AATE009625-PA
C2H2 ZF
593
618
YTCEYPGCSKAFSNASDRAKHQNRTH
AATE009625-PA
C2H2 ZF
624
649
YVCKAPGCTKRYTDPSSLRKHVKTVH
Links
Other
C2H2 ZF
family TFs
Other
Anopheles atroparvus
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy