CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACOM028540
(
Anopheles coluzzii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ACOM028540
T147644_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ttk
M05863_2.00
Drosophila melanogaster
DTRTCCTKDN
NHMAGGAYAH
SMiLE-seq
Isakova et al.(2017)
Ttk
0.773
0.848
ttk
M06469_2.00
Drosophila melanogaster
RTTATCCTK
MAGGATAAY
B1H
Mathelier et al.(2014)
MA0460.1
0.773
0.848
ttk
M06074_2.00
Drosophila melanogaster
RSMAGGAYMTYB
VRAKRTCCTKSY
B1H
Zhu et al.(2011)
ttk_FlyReg_FBgn0003870
0.773
0.848
ttk
M06075_2.00
Drosophila melanogaster
RTTATCCTK
MAGGATAAY
B1H
Zhu et al.(2011)
ttk_NAR_FBgn0003870
0.773
0.848
ttk
M06076_2.00
Drosophila melanogaster
CHHCCCYTA
TARGGGDDG
B1H
Zhu et al.(2011)
ttk-PA_SANGER_5_FBgn0003870
0.773
0.848
ttk
M06077_2.00
Drosophila melanogaster
TRTCCTK
MAGGAYA
B1H
Zhu et al.(2011)
ttk-PF_SANGER_5_FBgn0003870
0.773
0.848
ttk
M09665_2.00
Drosophila melanogaster
RWKRTCCTKB
VMAGGAYMWY
Misc
Kulakovskiy et al.(2009)
ttk
0.773
0.848
ttk
M10378_2.00
Drosophila melanogaster
SCAGGASC
GSTCCTGS
Transfac
Matys et al.(2006)
I$TTK69_01
0.773
0.848
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACOM028540-PA
C2H2 ZF
220
248
YQCMECAKDGFEKTFKNKYSFQRHAFLYH
ACOM028540-PA
C2H2 ZF
256
279
FPCTVCDKQFSRPDKMKNHLRLAH
Links
Other
C2H2 ZF
family TFs
Other
Anopheles coluzzii
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy