CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AFAF008408
(
Anopheles farauti
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
AFAF008408
T148622_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Glis2
M00129_2.00
Mus musculus
NKACCCCYYNN
NNRRGGGGTMN
PBM
Badis et al.(2009)
Glis2_1757
0.762
0.826
GLIS2
M02887_2.00
Homo sapiens
KACCCCCCRCRDHG
CDHYGYGGGGGGTM
SELEX
Jolma et al.(2013)
GLIS2_1
0.762
0.826
GLIS2
M04449_2.00
Homo sapiens
RCCCCCCRCRWHGH
DCDWYGYGGGGGGY
SELEX
Yin et al.(2017)
GLIS2_eDBD_HT-SELEX
0.762
0.826
GLIS2
M04450_2.00
Homo sapiens
DCWHYGYDGGGGGT
ACCCCCHRCRDWGH
SELEX
Yin et al.(2017)
GLIS2_eDBD_Methyl-HT-SELEX
0.762
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AFAF008408-PA
C2H2 ZF
256
278
HQCGKCGKCFSRAENLKIHLRSH
AFAF008408-PA
C2H2 ZF
284
308
YVCPVQGCNKAYSNSSDRFKHTRTH
AFAF008408-PA
C2H2 ZF
314
340
YVCKVPGCNKRYTDPSSLRKHVKTFKH
Links
Other
C2H2 ZF
family TFs
Other
Anopheles farauti
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy