CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AFAF010175
(
Anopheles farauti
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
AFAF010175
T148642_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Clamp
M01044_2.00
Drosophila melanogaster
YNTCYBKYTC
GARMVRGANR
PBM
Soruco et al.(2013)
CLAMP_Cterm6Zn
0.804
0.891
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AFAF010175-PA
C2H2 ZF
398
420
FTCNTCGGRFSRYSSLWSHKKLH
AFAF010175-PA
C2H2 ZF
426
448
YKCNVCGIAFAKAVYLKNHMRIH
AFAF010175-PA
C2H2 ZF
454
476
YKCGTCGMQFSQSPHLKNHERTH
AFAF010175-PA
C2H2 ZF
482
504
YVCEVCDKGFARHATLWNHRRIH
AFAF010175-PA
C2H2 ZF
510
532
YKCNRCQSAFSQAAHLKNHEKVH
AFAF010175-PA
C2H2 ZF
538
560
FKCDICSAAFADRFALKRHRGIH
Links
Other
C2H2 ZF
family TFs
Other
Anopheles farauti
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy