CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMEC006310
(
Anopheles melas
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
AMEC006310
T149303_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Kah
M03690_2.00
Drosophila melanogaster
NVCCACCTGTTN
NAACAGGTGGBN
SELEX
Nitta et al.(2015)
CG17181_1
0.768
0.832
Kah
M06137_2.00
Drosophila melanogaster
VCCACCTGT
ACAGGTGGB
B1H
Zhu et al.(2011)
CG17181_SANGER_5_FBgn0035144
0.768
0.832
Kah
M06138_2.00
Drosophila melanogaster
NVCCACCTGYHVVNN
NNBBDRCAGGTGGBN
B1H
Zhu et al.(2011)
CG17181_SOLEXA_5_FBgn0035144
0.768
0.832
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AMEC006310-PA
C2H2 ZF
378
400
HVCPECNKRYSTSSNLARHRQTH
AMEC006310-PA
C2H2 ZF
410
431
RCPYCSKVYVSMPAYSMHVRTH
AMEC006310-PA
C2H2 ZF
435
457
SKCPTCDKRFSRPWLLQGHIRTH
AMEC006310-PA
C2H2 ZF
463
485
FKCSVCSKAFADKSNLRAHVQTH
AMEC006310-PA
C2H2 ZF
491
512
YQCGRCGKSFALKSYLCKHEDS
Links
Other
C2H2 ZF
family TFs
Other
Anopheles melas
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy