CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMEC013971
(
Anopheles melas
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
AMEC013971
T149399_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
hkb
M03710_2.00
Drosophila melanogaster
VTCACGCCYHHN
NDDRGGCGTGAB
SELEX
Nitta et al.(2015)
hkb_1
0.796
0.899
hkb
M06470_2.00
Drosophila melanogaster
TCACGCCYM
KRGGCGTGA
B1H
Mathelier et al.(2014)
MA0450.1
0.796
0.899
hkb
M06168_2.00
Drosophila melanogaster
TCACGCCYM
KRGGCGTGA
B1H
Zhu et al.(2011)
hkb_NAR_FBgn0001204
0.796
0.899
hkb
M09666_2.00
Drosophila melanogaster
YMACGCCCMY
RKGGGCGTKR
Misc
Kulakovskiy et al.(2009)
hkb
0.796
0.899
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AMEC013971-PA
C2H2 ZF
180
202
FKCPHCDVAFSNNGQLKGHIRIH
AMEC013971-PA
C2H2 ZF
208
232
FKCDEPSCSKTFTRNEELTRHKRIH
AMEC013971-PA
C2H2 ZF
238
260
YGCQTCGKKFGRRDHLKKHSKTH
Links
Other
C2H2 ZF
family TFs
Other
Anopheles melas
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy