BGLB003738 (Biomphalaria glabrata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 BGLB003738 T150690_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Kah
M03690_2.00 		Drosophila melanogaster
NVCCACCTGTTN
NAACAGGTGGBN		 SELEX
Nitta et al.(2015)
CG17181_1 		0.771 0.841
Kah
M06137_2.00 		Drosophila melanogaster
VCCACCTGT
ACAGGTGGB		 B1H
Zhu et al.(2011)
CG17181_SANGER_5_FBgn0035144 		0.771 0.841
Kah
M06138_2.00 		Drosophila melanogaster
NVCCACCTGYHVVNN
NNBBDRCAGGTGGBN		 B1H
Zhu et al.(2011)
CG17181_SOLEXA_5_FBgn0035144 		0.771 0.841
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGLB003738-PA C2H2 ZF 555 577
BGLB003738-PA C2H2 ZF 587 608
BGLB003738-PA C2H2 ZF 612 634
BGLB003738-PA C2H2 ZF 640 662
BGLB003738-PA C2H2 ZF 668 689

Links

Other C2H2 ZF family TFs
Other Biomphalaria glabrata TFs

Invalid Input OrderBy

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action