BGLB012448 (Biomphalaria glabrata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 BGLB012448 T150830_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
gl
M03671_2.00
Drosophila melanogaster
RTTACCATACAAGTGCAV

BTGCACTTGTATGGTAAY
SELEX
Nitta et al.(2015)
gl_1
0.804 0.904
gl
M06078_2.00
Drosophila melanogaster
DAYNCWTBAAAT

ATTTVAWGNRTH
B1H
Zhu et al.(2011)
gl_FlyReg_FBgn0004618
0.804 0.904
gl
M06079_2.00
Drosophila melanogaster
TTRTABGGYTTC

GAARCCVTAYAA
B1H
Zhu et al.(2011)
gl_SANGER_5_FBgn0004618
0.804 0.904
gl
M06080_2.00
Drosophila melanogaster
NNBDWNTADGGCTTC

GAAGCCHTANWHVNN
B1H
Zhu et al.(2011)
gl_SOLEXA_5_FBgn0004618
0.804 0.904
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGLB012448-PA C2H2 ZF 520 541
BGLB012448-PA C2H2 ZF 547 569
BGLB012448-PA C2H2 ZF 575 597
BGLB012448-PA C2H2 ZF 603 625
BGLB012448-PA C2H2 ZF 631 653

Links

Other C2H2 ZF family TFs
Other Biomphalaria glabrata TFs

Invalid Input OrderBy

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action