BGLB013141 (Biomphalaria glabrata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 BGLB013141 T150842_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Sp5
M09016_2.00 		Mus musculus
CYCCKCCYHYHBCYYHBYYYHYHB
VDRDRRRVDRRGVDRDRGGMGGRG		 Misc
Kulakovskiy et al.(2013)
SP5_MOUSE.H11MO.0.C 		0.777 0.841
SP5
M10319_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP5_Q2 		0.777 0.841
Spps
M06159_2.00 		Drosophila melanogaster
KWDRCCMCGCCCMBH
DVKGGGCGKGGYHWM		 B1H
Zhu et al.(2011)
CG5669_SANGER_10_FBgn0039169 		0.777 0.797
Spps
M06160_2.00 		Drosophila melanogaster
BDDGCCMCGCCCMYN
NRKGGGCGKGGCHHV		 B1H
Zhu et al.(2011)
CG5669_SOLEXA_5_FBgn0039169 		0.777 0.797
SP8
M02898_2.00 		Homo sapiens
VMCACBCCCMCH
DGKGGGVGTGKB		 SELEX
Jolma et al.(2013)
SP8_1 		0.774 0.841
SP8
M04517_2.00 		Homo sapiens
NMCMCGCCCMYH
DRKGGGCGKGKN		 SELEX
Yin et al.(2017)
SP8_eDBD_HT-SELEX 		0.774 0.841
SP9
M04645_2.00 		Homo sapiens
VMCMCGCCCMYH
DRKGGGCGKGKB		 SELEX
Yin et al.(2017)
SP9_eDBD_HT-SELEX 		0.774 0.841
SP8
M04518_2.00 		Homo sapiens
RHCACGCCCMYH
DRKGGGCGTGDY		 SELEX
Yin et al.(2017)
SP8_eDBD_Methyl-HT-SELEX 		0.774 0.841
SP9
M04646_2.00 		Homo sapiens
RYCACGCCCMYH
DRKGGGCGTGRY		 SELEX
Yin et al.(2017)
SP9_eDBD_Methyl-HT-SELEX 		0.774 0.841
Sp1
M03682_2.00 		Drosophila melanogaster
HNGCCACGCCCARK
MYTGGGCGTGGCND		 SELEX
Nitta et al.(2015)
Sp1_1 		0.761 0.826
Sp1
M06117_2.00 		Drosophila melanogaster
DHYMCGCCCMY
RKGGGCGKRDH		 B1H
Zhu et al.(2011)
Sp1_SANGER_5_FBgn0020378 		0.761 0.826
Sp1
M06118_2.00 		Drosophila melanogaster
NKHHMCGCCCMYNN
NNRKGGGCGKDDMN		 B1H
Zhu et al.(2011)
Sp1_SOLEXA_2.5_FBgn0020378 		0.761 0.826
Sp4
M01862_2.00 		Mus musculus
NMCGCCCMY
RKGGGCGKN		 PBM
Weirauch et al.(2014)
pTH4998 		0.761 0.812
Sp4
M00133_2.00 		Mus musculus
HMCGCCCMYN
NRKGGGCGKD		 PBM
Badis et al.(2009)
Sp4_1011 		0.761 0.812
Sp4
M05859_2.00 		Mus musculus
DGNYMCGCCCHNN
NNDGGGCGKRNCH		 SMiLE-seq
Isakova et al.(2017)
SP4 		0.761 0.812
Sp4
M08975_2.00 		Mus musculus
BYHDKCYCCGCCYYYHBSBB
VVSVDRRRGGCGGRGMHDRV		 Misc
Kulakovskiy et al.(2013)
SP4_MOUSE.H11MO.0.B 		0.761 0.812
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGLB013141-PA C2H2 ZF 269 293
BGLB013141-PA C2H2 ZF 299 323
BGLB013141-PA C2H2 ZF 329 351

Links

Other C2H2 ZF family TFs
Other Biomphalaria glabrata TFs

Invalid Input OrderBy

329 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action