CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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MDOA006149
(
Musca domestica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
MDOA006149
T151282_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wor
M03664_2.00
Drosophila melanogaster
GYRACAGGTGYAH
DTRCACCTGTYRC
SELEX
Nitta et al.(2015)
wor_1
0.784
0.947
wor
M03665_2.00
Drosophila melanogaster
DTRCACCTGTYGY
RCRACAGGTGYAH
SELEX
Nitta et al.(2015)
wor_2
0.784
0.947
wor
M06051_2.00
Drosophila melanogaster
CACCTGY
RCAGGTG
B1H
Zhu et al.(2011)
wor_SANGER_2.5_FBgn0001983
0.784
0.947
wor
M06052_2.00
Drosophila melanogaster
VCACCTGY
RCAGGTGB
B1H
Zhu et al.(2011)
wor_SOLEXA_2.5_FBgn0001983
0.784
0.947
esg
M06050_2.00
Drosophila melanogaster
CACCTGH
DCAGGTG
B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981
0.779
0.851
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDOA006149-PA
C2H2 ZF
369
391
YHCNDCGKSYSTFSGLTKHQQFH
MDOA006149-PA
C2H2 ZF
404
426
FNCKNCDKTYVSLGALKMHIRTH
MDOA006149-PA
C2H2 ZF
430
452
CKCPICGKAFSRPWLLQGHIRTH
MDOA006149-PA
C2H2 ZF
458
480
FSCQHCNRAFADRSNLRAHMQTH
MDOA006149-PA
C2H2 ZF
486
507
YSCPTCTKSFSRMSLLGKHLQN
Links
Other
C2H2 ZF
family TFs
Other
Musca domestica
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy