CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDOA009968
(
Musca domestica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
MDOA009968
T151345_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Clamp
M01044_2.00
Drosophila melanogaster
YNTCYBKYTC
GARMVRGANR
PBM
Soruco et al.(2013)
CLAMP_Cterm6Zn
0.812
0.935
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDOA009968-PA
C2H2 ZF
438
460
FTCNICGGTFSRYSSLWSHKKLH
MDOA009968-PA
C2H2 ZF
466
488
YKCTICGLAFAKAVYLKNHARIH
MDOA009968-PA
C2H2 ZF
494
516
YKCQTCGMQFSQSPHLKNHERTH
MDOA009968-PA
C2H2 ZF
522
544
YVCEVCDKGFARHATLWNHRRIH
MDOA009968-PA
C2H2 ZF
550
572
YKCDICGTAFSQAAHLKNHAKVH
MDOA009968-PA
C2H2 ZF
578
600
FKCDICLAAFADRFALKRHRGIH
Links
Other
C2H2 ZF
family TFs
Other
Musca domestica
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy