CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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MDOA012721
(
Musca domestica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
MDOA012721
T151401_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
gl
M03671_2.00
Drosophila melanogaster
RTTACCATACAAGTGCAV
BTGCACTTGTATGGTAAY
SELEX
Nitta et al.(2015)
gl_1
0.825
0.991
gl
M06078_2.00
Drosophila melanogaster
DAYNCWTBAAAT
ATTTVAWGNRTH
B1H
Zhu et al.(2011)
gl_FlyReg_FBgn0004618
0.825
0.991
gl
M06079_2.00
Drosophila melanogaster
TTRTABGGYTTC
GAARCCVTAYAA
B1H
Zhu et al.(2011)
gl_SANGER_5_FBgn0004618
0.825
0.991
gl
M06080_2.00
Drosophila melanogaster
NNBDWNTADGGCTTC
GAAGCCHTANWHVNN
B1H
Zhu et al.(2011)
gl_SOLEXA_5_FBgn0004618
0.825
0.991
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDOA012721-PA
C2H2 ZF
453
474
LCRLCGKTYARPSTLKTHLRTH
MDOA012721-PA
C2H2 ZF
480
502
YRCPDCNKSFSQAANLTAHVRTH
MDOA012721-PA
C2H2 ZF
508
530
FRCPICDRRFSQSSSVTTHMRTH
MDOA012721-PA
C2H2 ZF
536
558
YRCSACKKSFSDSSTLTKHLRIH
MDOA012721-PA
C2H2 ZF
564
586
YQCKLCLLRFSQSGNLNRHMRVH
Links
Other
C2H2 ZF
family TFs
Other
Musca domestica
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy