CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PPAI000954
(
Phlebotomus papatasi
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
PPAI000954
T151475_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
hkb
M03710_2.00
Drosophila melanogaster
VTCACGCCYHHN
NDDRGGCGTGAB
SELEX
Nitta et al.(2015)
hkb_1
0.789
0.884
hkb
M06470_2.00
Drosophila melanogaster
TCACGCCYM
KRGGCGTGA
B1H
Mathelier et al.(2014)
MA0450.1
0.789
0.884
hkb
M06168_2.00
Drosophila melanogaster
TCACGCCYM
KRGGCGTGA
B1H
Zhu et al.(2011)
hkb_NAR_FBgn0001204
0.789
0.884
hkb
M09666_2.00
Drosophila melanogaster
YMACGCCCMY
RKGGGCGTKR
Misc
Kulakovskiy et al.(2009)
hkb
0.789
0.884
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPAI000954-PA
C2H2 ZF
130
152
FKCPHCDVAFSNNGQLKGHIRIH
PPAI000954-PA
C2H2 ZF
158
182
FKCDDSNCGKTFTRNEELTRHKRIH
PPAI000954-PA
C2H2 ZF
188
210
FACTVCGKKFGRRDHLKKHTKIH
Links
Other
C2H2 ZF
family TFs
Other
Phlebotomus papatasi
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy