A_03560 (Schistosoma haematobium)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 A_03560 T151789_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
cbt
M03705_2.00 		Drosophila melanogaster
DMCACRCCCMY
RKGGGYGTGKH		 SELEX
Nitta et al.(2015)
cbt_1 		0.759 0.647
cbt
M03706_2.00 		Drosophila melanogaster
RMCRCGCCCMCHH
DDGKGGGCGYGKY		 SELEX
Nitta et al.(2015)
cbt_2 		0.759 0.647
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
A_03560 C2H2 ZF 434 458
A_03560 C2H2 ZF 464 488
A_03560 C2H2 ZF 494 515

Links

Other C2H2 ZF family TFs
Other Schistosoma haematobium TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Smp_172460 Schistosoma mansoni Smp_172460 I 0.827
Sjc_0070890 Schistosoma japonicum Sjc_0070890 N 0.814
csin110296 Clonorchis sinensis csin110296 N 0.787
T265_04314 Opisthorchis viverrini T265_04314 N 0.787
LCUP009846 Lucilia cuprina LCUP009846 I 0.762
MDOA003755 Musca domestica MDOA003755 I 0.762
MDOA014851 Musca domestica MDOA014851 I 0.762
D915_00578 Fasciola hepatica D915_00578 I 0.761
cbt Drosophila yakuba FBgn0233632 I 0.759
cbt Drosophila sechellia FBgn0171577 I 0.759
cbt Drosophila mojavensis FBgn0140770 I 0.759
cbt Drosophila erecta FBgn0116778 I 0.759
cbt Drosophila melanogaster FBgn0043364 D 0.759
cbt Drosophila simulans FBgn0194348 I 0.759
cbt Drosophila willistoni FBgn0226609 I 0.759
cbt Drosophila virilis FBgn0206865 I 0.759
cbt Drosophila ananassae FBgn0101744 I 0.759
SMU15001129 Schmidtea mediterranea SMU15001129 I 0.757
ENSAMXG00000019111 Astyanax mexicanus ENSAMXG00000019111 I 0.756