ACOC_0001130401 (Angiostrongylus costaricensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 ACOC_0001130401 T151927_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
odd-2
M00618_2.00
Caenorhabditis elegans
NGCTACYGK

MCRGTAGCN
PBM
Narasimhan et al.(2015)
pTH9150
0.783 0.884
Osr2
M00132_2.00
Mus musculus
NGCTWCYGNN

NNCRGWAGCN
PBM
Badis et al.(2009)
Osr2_1727
0.770 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACOC_0001130401-mRNA-1 C2H2 ZF 74 96
ACOC_0001130401-mRNA-1 C2H2 ZF 102 124
ACOC_0001130401-mRNA-1 C2H2 ZF 130 152

Links

Other C2H2 ZF family TFs
Other Angiostrongylus costaricensis TFs

Invalid Input OrderBy

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action