CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ALUE_0001029501
(
Ascaris lumbricoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ALUE_0001029501
T151949_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
klf-3
M00617_2.00
Caenorhabditis elegans
NHMCGCCCH
DGGGCGKDN
PBM
Narasimhan et al.(2015)
pTH9072
0.764
0.783
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ALUE_0001029501-mRNA-1
C2H2 ZF
187
211
HECAHPGCRKKYSKSSHLKAHMRTH
ALUE_0001029501-mRNA-1
C2H2 ZF
217
241
YCCNWPSCGWKFARSDELTRHYRKH
ALUE_0001029501-mRNA-1
C2H2 ZF
247
269
FNCSVCERAFSRSDHLSLHMKRH
Links
Other
C2H2 ZF
family TFs
Other
Ascaris lumbricoides
TFs
121 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy