CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ANCDUO_02710
(
Ancylostoma duodenale
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ANCDUO_02710
T152145_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
blmp-1
M08103_2.00
Caenorhabditis elegans
YTYTCHYTTTY
RAAARDGARAR
ChIP-seq
Mathelier et al.(2014)
MA0537.1
0.797
0.904
blmp-1
M08195_2.00
Caenorhabditis elegans
VACTTTCDCY
RGHGAAAGTB
ChIP-seq
Contrino et al.(2012)
Mw137
0.797
0.904
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ANCDUO_02710
C2H2 ZF
550
572
YACKECHKTFGQLSNLKVHVRTH
ANCDUO_02710
C2H2 ZF
578
600
FKCTVCGKEFTQLAHLQKHNLVH
ANCDUO_02710
C2H2 ZF
606
628
HRCDICDKRFSSTSNLKTHLRLH
ANCDUO_02710
C2H2 ZF
634
656
YACDVCSAKFTQYVHLRLHKRLH
ANCDUO_02710
C2H2 ZF
662
683
YACMSCGKKYISPSGLRTHWKT
Links
Other
C2H2 ZF
family TFs
Other
Ancylostoma duodenale
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy