CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ANCDUO_04077
(
Ancylostoma duodenale
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ANCDUO_04077
T152149_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
klf-3
M00617_2.00
Caenorhabditis elegans
NHMCGCCCH
DGGGCGKDN
PBM
Narasimhan et al.(2015)
pTH9072
0.761
0.754
KLF3
M04418_2.00
Homo sapiens
RRCCRCGCCCH
DGGGCGYGGYY
SELEX
Yin et al.(2017)
KLF3_FL_HT-SELEX
0.761
0.768
KLF3
M08876_2.00
Homo sapiens
NSNNVCCMCRCCCHBBBBN
NVVVVDGGGYGKGGBNNSN
Misc
Kulakovskiy et al.(2013)
KLF3_HUMAN.H11MO.0.B
0.761
0.768
Klf3
M08982_2.00
Mus musculus
NSNNVCCMCRCCCHBBBBN
NVVVVDGGGYGKGGBNNSN
Misc
Kulakovskiy et al.(2013)
KLF3_MOUSE.H11MO.0.A
0.761
0.768
KLF3
M10172_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF3_Q3_01
0.761
0.768
KLF3
M10173_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF3_Q3
0.761
0.768
KLF3
M04419_2.00
Homo sapiens
DRCCACGCCCH
DGGGCGTGGYH
SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_1
0.761
0.768
KLF3
M04420_2.00
Homo sapiens
RRSCGCARCCCN
NGGGYTGCGSYY
SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_2
0.761
0.768
Klf7
M00134_2.00
Mus musculus
NHHMCRCCCH
DGGGYGKDDN
PBM
Badis et al.(2009)
Klf7_0974
0.757
0.797
KLF7
M08298_2.00
Homo sapiens
VVCHMCGCCCH
DGGGCGKDGBB
ChIP-seq
Schmitges et al.(2016)
O75840.MEME
0.757
0.797
KLF6
M04400_2.00
Homo sapiens
NVMCACRCCCH
DGGGYGTGKBN
SELEX
Yin et al.(2017)
KLF6_eDBD_HT-SELEX
0.757
0.783
KLF6
M08857_2.00
Homo sapiens
BYBYVNBCYMCDCCCYBBN
NVVRGGGHGKRGVNBRVRV
Misc
Kulakovskiy et al.(2013)
KLF6_HUMAN.H11MO.0.A
0.757
0.783
Klf6
M08962_2.00
Mus musculus
BYBYVNBCYMCDCCCYBBN
NVVRGGGHGKRGVNBRVRV
Misc
Kulakovskiy et al.(2013)
KLF6_MOUSE.H11MO.0.B
0.757
0.783
KLF6
M10113_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CPBP_Q6
0.757
0.783
KLF6
M04401_2.00
Homo sapiens
NRCCACGCCCH
DGGGCGTGGYN
SELEX
Yin et al.(2017)
KLF6_eDBD_Methyl-HT-SELEX
0.757
0.783
KLF1
M00226_2.00
Homo sapiens
CMCGCCCM
KGGGCGKG
PBM
Barrera et al.(2016)
KLF1_REF
0.757
0.754
KLF1
M08293_2.00
Homo sapiens
NVNNNRCCMCRCCCH
DGGGYGKGGYNNNBN
ChIP-seq
Schmitges et al.(2016)
Q13351.MEME
0.757
0.754
KLF1
M08871_2.00
Homo sapiens
SVNDGCCMCRCCCH
DGGGYGKGGCHNBS
Misc
Kulakovskiy et al.(2013)
KLF1_HUMAN.H11MO.0.A
0.757
0.754
KLF1
M10163_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EKLF_Q5_01
0.757
0.754
KLF1
M10164_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EKLF_Q5
0.757
0.754
KLF1
M00224_2.00
Homo sapiens
YMCGCCCH
DGGGCGKR
PBM
Barrera et al.(2016)
KLF1_H299Y
0.757
0.739
Klf8
M00779_2.00
Mus musculus
NNNMCRCCYN
NRGGYGKNNN
PBM
Weirauch et al.(2013)
pTH3086
0.757
0.754
KLF8
M08867_2.00
Homo sapiens
CACMCMCKG
CMGKGKGTG
Misc
Kulakovskiy et al.(2013)
KLF8_HUMAN.H11MO.0.C
0.757
0.754
Klf8
M09000_2.00
Mus musculus
CACMCMCKG
CMGKGKGTG
Misc
Kulakovskiy et al.(2013)
KLF8_MOUSE.H11MO.0.C
0.757
0.754
KLF8
M10147_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF8_Q5_01
0.757
0.754
KLF8
M10148_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF8_Q5
0.757
0.754
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ANCDUO_04077
C2H2 ZF
170
194
HRCEQPGCNKVYTKSSHLKAHQRIH
ANCDUO_04077
C2H2 ZF
200
224
YFCQWPNCSWTFARSDELTRHYRKH
ANCDUO_04077
C2H2 ZF
230
252
FRCPECSRCFARSDHLQLHMKRH
Links
Other
C2H2 ZF
family TFs
Other
Ancylostoma duodenale
TFs
326 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy