ASU_05469 (Ascaris suum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 ASU_05469 T152304_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Blimp-1
M03692_2.00 		Drosophila melanogaster
NNYACTTTCVYYN
NRRBGAAAGTRNN		 SELEX
Nitta et al.(2015)
Blimp-1_1 		0.781 0.860
Blimp-1
M06141_2.00 		Drosophila melanogaster
ACTTTCACTTTY
RAAAGTGAAAGT		 B1H
Zhu et al.(2011)
Blimp-1_NAR_FBgn0035625 		0.781 0.860
Blimp-1
M06142_2.00 		Drosophila melanogaster
RCTTTCMCTTTY
RAAAGKGAAAGY		 B1H
Zhu et al.(2011)
Blimp-1_SANGER_5_FBgn0035625 		0.781 0.860
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ASU_05469 C2H2 ZF 563 585
ASU_05469 C2H2 ZF 591 613
ASU_05469 C2H2 ZF 619 641
ASU_05469 C2H2 ZF 647 669
ASU_05469 C2H2 ZF 675 696

Links

Other C2H2 ZF family TFs
Other Ascaris suum TFs

Invalid Input OrderBy

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action