CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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ASU_05504
(
Ascaris suum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ASU_05504
T152305_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
klu-2
M00645_2.00
Caenorhabditis elegans
NNCCCMCKYN
NRMGKGGGNN
PBM
Narasimhan et al.(2015)
pTH9354
0.763
0.783
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ASU_05504
C2H2 ZF
386
408
YLCRFCHKDFKRPDILSRHLRRH
ASU_05504
C2H2 ZF
414
436
FKCEVCLRYFSRSDHLKTHRRTH
ASU_05504
C2H2 ZF
442
466
YQCPLCVYAARRRDVLTRHMSTRHH
Links
Other
C2H2 ZF
family TFs
Other
Ascaris suum
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCNE_0000622401
Toxocara canis
TCNE_0000622401
I
0.790
L889_g28325
Steinernema feltiae
L889_g28325
I
0.767
klu-2
Caenorhabditis elegans
WBGene00022592
D
0.763
CBG12610
Caenorhabditis briggsae
CBG12610
I
0.763
CRE07023
Caenorhabditis remanei
CRE07023
I
0.763
CBN10213
Caenorhabditis brenneri
CBN10213
I
0.763
CBN19187
Caenorhabditis brenneri
CBN19187
I
0.763
TELCIR_01018
Teladorsagia circumcincta
TELCIR_01018
I
0.760
HPLM_0001133101
Haemonchus placei
HPLM_0001133101
I
0.760
ANCCAN_17930
Ancylostoma caninum
ANCCAN_17930
I
0.760
CJA33261
Caenorhabditis japonica
CJA33261
I
0.760
HCOI01254700
Haemonchus contortus
HCOI01254700
I
0.760
ANCCEY_13832
Ancylostoma ceylanicum
ANCCEY_13832
I
0.760
PPA04971
Pristionchus pacificus
PPA04971
N
0.757
RSKR_0000033200
Rhabditophanes kr3021
RSKR_0000033200
N
0.757
scaffold607-EXSNAP2012.9
Pristionchus exspectatus
scaffold607-EXSNAP2012.9
N
0.757