CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ASU_09688
(
Ascaris suum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ASU_09688
T152322_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
erm
M03686_2.00
Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA
SELEX
Nitta et al.(2015)
CG31670_1
0.761
0.848
erm
M06128_2.00
Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM
B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375
0.761
0.848
erm
M06129_2.00
Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV
B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375
0.761
0.848
FEZF1
M08307_2.00
Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN
ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE
0.757
0.841
FEZF1
M08889_2.00
Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH
Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C
0.757
0.841
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ASU_09688
C2H2 ZF
71
93
FECTECGKVFNAHYNLTRHMPVH
ASU_09688
C2H2 ZF
99
121
FACKICGKAFRQASTLCRHKIIH
ASU_09688
C2H2 ZF
127
149
HTCPTCGKCFNRSSTLNTHIRIH
ASU_09688
C2H2 ZF
155
177
YVCELCGKGFHQNGNYKNHKLTH
ASU_09688
C2H2 ZF
183
205
FKCGVCNKAFHQTYNLTFHMHTH
ASU_09688
C2H2 ZF
211
234
FVCTICTKGFCRNFDLKKHMRKLH
Links
Other
C2H2 ZF
family TFs
Other
Ascaris suum
TFs
152 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy