CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ASU_13892
(
Ascaris suum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ASU_13892
T152339_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
klf-3
M00617_2.00
Caenorhabditis elegans
NHMCGCCCH
DGGGCGKDN
PBM
Narasimhan et al.(2015)
pTH9072
0.764
0.783
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ASU_13892
C2H2 ZF
187
211
HECAHPGCRKKYSKSSHLKAHMRTH
ASU_13892
C2H2 ZF
217
241
YCCNWPSCGWKFARSDELTRHYRKH
ASU_13892
C2H2 ZF
247
269
FNCSVCERAFSRSDHLSLHMKRH
Links
Other
C2H2 ZF
family TFs
Other
Ascaris suum
TFs
121 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy