CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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B_00892
(
Schistosoma haematobium
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
B_00892
T152372_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ci
M03672_2.00
Drosophila melanogaster
NCGMCCACMN
NKGTGGKCGN
SELEX
Nitta et al.(2015)
ci_1
0.778
0.809
ci
M06084_2.00
Drosophila melanogaster
RGMCCACMCAC
GTGKGTGGKCY
B1H
Zhu et al.(2011)
Ci_SANGER_5_FBgn0004859
0.778
0.809
ci
M02644_2.00
Drosophila melanogaster
GACCACCCAMG
CKTGGGTGGTC
SELEX
Hallikas et al.(2006)
Ci
0.778
0.809
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
B_00892
C2H2 ZF
979
1004
TTCRWGDCTLQFDDQDELVKHLSTEH
B_00892
C2H2 ZF
1012
1039
FVCLWRECVRGTRPFKAQYMLVVHMRRH
B_00892
C2H2 ZF
1045
1069
HKCIFEGCTKRYSRLENLKTHLRSH
B_00892
C2H2 ZF
1075
1100
YQCEIPGCNKAFSNASDRAKHQNRTH
B_00892
C2H2 ZF
1106
1131
YTCKVDGCSKRYTDPSSLRKHVKTVH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma haematobium
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy