BXY_0564300 (Bursaphelenchus xylophilus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 BXY_0564300 T152455_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
sptf-3
M00632_2.00
Caenorhabditis elegans
NNMCGCCCMY

RKGGGCGKNN
PBM
Narasimhan et al.(2015)
pTH9394
0.767 0.855
Sp4
M01862_2.00
Mus musculus
NMCGCCCMY

RKGGGCGKN
PBM
Weirauch et al.(2014)
pTH4998
0.763 0.783
Sp4
M00133_2.00
Mus musculus
HMCGCCCMYN

NRKGGGCGKD
PBM
Badis et al.(2009)
Sp4_1011
0.763 0.783
Sp4
M05859_2.00
Mus musculus
DGNYMCGCCCHNN

NNDGGGCGKRNCH
SMiLE-seq
Isakova et al.(2017)
SP4
0.763 0.783
Sp4
M08975_2.00
Mus musculus
BYHDKCYCCGCCYYYHBSBB

VVSVDRRRGGCGGRGMHDRV
Misc
Kulakovskiy et al.(2013)
SP4_MOUSE.H11MO.0.B
0.763 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BXY_0564300.1 C2H2 ZF 269 291
BXY_0564300.1 C2H2 ZF 297 321
BXY_0564300.1 C2H2 ZF 327 349

Links

Other C2H2 ZF family TFs
Other Bursaphelenchus xylophilus TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACOC_0001203801 Angiostrongylus costaricensis ACOC_0001203801 I 0.771
ALUE_0000441701 Ascaris lumbricoides ALUE_0000441701 I 0.771
ANCCAN_00594 Ancylostoma caninum ANCCAN_00594 I 0.771
ANCCEY_05940 Ancylostoma ceylanicum ANCCEY_05940 I 0.771
ANCDUO_10264 Ancylostoma duodenale ANCDUO_10264 I 0.771
Aqu1.217456 Amphimedon queenslandica Aqu1.217456 I 0.779
ASIM_0001129301 Anisakis simplex ASIM_0001129301 I 0.787
ASU_13052 Ascaris suum ASU_13052 I 0.771
augustus_masked-nMf.1.1.scaf01525-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf01525-processed-gene-0.0 I 0.765
BGLB013141 Biomphalaria glabrata BGLB013141 I 0.757
Bm6499 Brugia malayi Bm6499 I 0.767
BTMF_0000199301 Brugia timori BTMF_0000199301 I 0.767
CBG20386 Caenorhabditis briggsae CBG20386 I 0.767
CRE28577 Caenorhabditis remanei CRE28577 I 0.767
D918_01017 Trichuris suis D918_01017 I 0.757
DICVIV_09031 Dictyocaulus viviparus DICVIV_09031 I 0.771
DME_0000423301 Dracunculus medinensis DME_0000423301 I 0.791
EEL_0000517301 Elaeophora elaphi EEL_0000517301 I 0.767
ENSAMXG00000004713 Astyanax mexicanus ENSAMXG00000004713 I 0.763
ENSAMXG00000015260 Astyanax mexicanus ENSAMXG00000015260 I 0.770
ENSGACG00000006667 Gasterosteus aculeatus ENSGACG00000006667 I 0.767
ENSLACG00000011942 Latimeria chalumnae ENSLACG00000011942 I 0.763
ENSPMAG00000001574 Petromyzon marinus ENSPMAG00000001574 I 0.770
EVEC_0000041101 Enterobius vermicularis EVEC_0000041101 I 0.771
GPUH_0001030801 Gongylonema pulchrum GPUH_0001030801 I 0.774
HCOI00688600 Haemonchus contortus HCOI00688600 I 0.771
HHAL002953-PA Halyomorpha halys HHAL002953-PA I 0.767
HPBE_0001438901 Heligmosomoides bakeri HPBE_0001438901 I 0.771
HPLM_0000529101 Haemonchus placei HPLM_0000529101 I 0.771
ISCW020450 Ixodes scapularis ISCW020450 I 0.763
L596_g19604 Steinernema carpocapsae L596_g19604 I 0.765
L889_g32073 Steinernema feltiae L889_g32073 I 0.765
L892_g17070 Steinernema scapterisci L892_g17070 I 0.765
L893_g2044 Steinernema glaseri L893_g2044 I 0.765
L898_g7955 Steinernema monticolum L898_g7955 I 0.761
LLOJ008095 Lutzomyia longipalpis LLOJ008095 I 0.757
LOAG_01580 Loa loa LOAG_01580 I 0.767
MhA1_Contig599.frz3.gene7 Meloidogyne hapla MhA1_Contig599.frz3.gene7 I 0.774
nAv.1.0.1.g06936 Acanthocheilonema viteae nAv.1.0.1.g06936 I 0.767
NBR_0001206901 Nippostrongylus brasiliensis NBR_0001206901 I 0.771
nDi.2.2.2.g02202 Dirofilaria immitis nDi.2.2.2.g02202 I 0.767
NECAME_13378 Necator americanus NECAME_13378 I 0.771
NEMVEDRAFT_v1g27142 Nematostella vectensis NEMVEDRAFT_v1g27142 I 0.763
nLs.2.1.2.g07946 Litomosoides sigmodontis nLs.2.1.2.g07946 I 0.767
nOo.2.0.1.g09582 Onchocerca ochengi nOo.2.0.1.g09582 I 0.767
nRc.2.0.1.g30796 Romanomermis culicivorax nRc.2.0.1.g30796 I 0.760
Ocbimv22017043m.g Octopus bimaculoides Ocbimv22017043m.g I 0.763
RSKR_0000732300 Rhabditophanes kr3021 RSKR_0000732300 I 0.783
RSKR_0000732400 Rhabditophanes kr3021 RSKR_0000732400 I 0.803
SBAD_0000755901 Soboliphyme baturini SBAD_0000755901 I 0.764
SMUV_0000007001 Syphacia muris SMUV_0000007001 I 0.771
sp3a Danio rerio ENSDARG00000001549 I 0.766
Sp4 Mus musculus ENSMUSG00000025323 D 0.763
Sp4 Rattus norvegicus ENSRNOG00000005472 I 0.763
sp4 Danio rerio ENSDARG00000005186 I 0.763
sptf-3 Caenorhabditis elegans WBGene00012735 D 0.767
SPU_009831 Strongylocentrotus purpuratus SPU_009831 I 0.760
SPU_009832 Strongylocentrotus purpuratus SPU_009832 I 0.760
TMUE_s0106000200 Trichuris muris TMUE_s0106000200 I 0.757
TriadG7637 Trichoplax adhaerens TriadG7637 I 0.763
TTRE_0000693001 Trichuris trichiura TTRE_0000693001 I 0.757
WBGene00237583 Onchocerca volvulus WBGene00237583 I 0.767
XP_002166590.1 Hydra magnipapillata XP_002166590.1 I 0.779