csin113630 (Clonorchis sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 csin113630 T152738_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SP8
M02898_2.00 		Homo sapiens
VMCACBCCCMCH
DGKGGGVGTGKB		 SELEX
Jolma et al.(2013)
SP8_1 		0.760 0.768
SP8
M04517_2.00 		Homo sapiens
NMCMCGCCCMYH
DRKGGGCGKGKN		 SELEX
Yin et al.(2017)
SP8_eDBD_HT-SELEX 		0.760 0.768
SP9
M04645_2.00 		Homo sapiens
VMCMCGCCCMYH
DRKGGGCGKGKB		 SELEX
Yin et al.(2017)
SP9_eDBD_HT-SELEX 		0.760 0.768
SP8
M04518_2.00 		Homo sapiens
RHCACGCCCMYH
DRKGGGCGTGDY		 SELEX
Yin et al.(2017)
SP8_eDBD_Methyl-HT-SELEX 		0.760 0.768
SP9
M04646_2.00 		Homo sapiens
RYCACGCCCMYH
DRKGGGCGTGRY		 SELEX
Yin et al.(2017)
SP9_eDBD_Methyl-HT-SELEX 		0.760 0.768
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
csin113630 C2H2 ZF 574 596
csin113630 C2H2 ZF 602 626
csin113630 C2H2 ZF 632 654

Links

Other C2H2 ZF family TFs
Other Clonorchis sinensis TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SROB_0000565401 Schistosoma rodhaini SROB_0000565401 I 0.792
Smp_040390 Schistosoma mansoni Smp_040390 I 0.792
DAPPUDRAFT_114437 Daphnia pulex DAPPUDRAFT_114437 I 0.776
Sjc_0019150 Schistosoma japonicum Sjc_0019150 I 0.776
SMRZ_0001128801 Schistosoma margrebowiei SMRZ_0001128801 I 0.776
SCUD_0002146901 Schistosoma curassoni SCUD_0002146901 I 0.776
SMTD_0000803501 Schistosoma mattheei SMTD_0000803501 I 0.776
TRE_0001792901 Trichobilharzia regenti TRE_0001792901 I 0.776
A_07213 Schistosoma haematobium A_07213 I 0.776
PPAI008544 Phlebotomus papatasi PPAI008544 I 0.770
T265_04072 Opisthorchis viverrini T265_04072 N 0.768
D915_05674 Fasciola hepatica D915_05674 I 0.767
ECPE_0000615101 Echinostoma caproni ECPE_0000615101 I 0.767
ENSGMOG00000004393 Gadus morhua ENSGMOG00000004393 I 0.764
sp5l Gasterosteus aculeatus ENSGACG00000008991 I 0.764
ENSONIG00000012117 Oreochromis niloticus ENSONIG00000012117 I 0.764
sp5l Danio rerio ENSDARG00000010124 I 0.764
sp5l Takifugu rubripes ENSTRUG00000012835 I 0.764
ENSXMAG00000010161 Xiphophorus maculatus ENSXMAG00000010161 I 0.764
ENSAMXG00000013057 Astyanax mexicanus ENSAMXG00000013057 I 0.764
ENSPFOG00000008204 Poecilia formosa ENSPFOG00000008204 I 0.764
sp5l Oryzias latipes ENSORLG00000007526 I 0.764
AATE001783 Anopheles atroparvus AATE001783 I 0.763
ADAC005719 Anopheles darlingi ADAC005719 I 0.763
ACOM036255 Anopheles coluzzii ACOM036255 I 0.763
AARA010383 Anopheles arabiensis AARA010383 I 0.763
ADIR001426 Anopheles dirus ADIR001426 I 0.763
AQUA005753 Anopheles quadriannulatus AQUA005753 I 0.763
ACUA015471 Anopheles culicifacies ACUA015471 I 0.763
ASIS015809 Anopheles sinensis ASIS015809 I 0.763
ASTEI01153 Anopheles stephensi ASTEI01153 I 0.763
AGAP000674 Anopheles gambiae AGAP000674 I 0.763
AMEC013887 Anopheles melas AMEC013887 I 0.763
AFAF003469 Anopheles farauti AFAF003469 I 0.763
AEPI000653 Anopheles epiroticus AEPI000653 I 0.763
AMAM012099 Anopheles maculatus AMAM012099 I 0.763
AFUN011446 Anopheles funestus AFUN011446 I 0.763
SP5 Taeniopygia guttata ENSTGUG00000008736 I 0.761
NEMVEDRAFT_v1g99612 Nematostella vectensis NEMVEDRAFT_v1g99612 I 0.760
LotgiG58417 Lottia gigantea LotgiG58417 I 0.760
SMAR004861 Strigamia maritima SMAR004861 I 0.760
SP9 Tetraodon nigroviridis ENSTNIG00000016949 I 0.760
SMAR004954 Strigamia maritima SMAR004954 I 0.760
SP9 Takifugu rubripes ENSTRUG00000017609 I 0.760
sp8b Tetraodon nigroviridis ENSTNIG00000018442 I 0.760
sp8b Takifugu rubripes ENSTRUG00000015810 I 0.760
SP8 Tursiops truncatus ENSTTRG00000013387 I 0.760
ENSXMAG00000005380 Xiphophorus maculatus ENSXMAG00000005380 I 0.760
ISCW023685 Ixodes scapularis ISCW023685 I 0.760
XP_002933331 Xenopus tropicalis XP_002933331 I 0.760
sp8.L Xenopus laevis XB-GENE-1216193 I 0.760
Sakowv30026949m.g Saccoglossus kowalevskii Sakowv30026949m.g I 0.760
Sakowv30026942m.g Saccoglossus kowalevskii Sakowv30026942m.g I 0.760
sp9 Xenopus tropicalis XB-GENE-5931012 I 0.760
XP_002933332 Xenopus tropicalis XP_002933332 I 0.760
PXEA_0002750301 Protopolystoma xenopodis PXEA_0002750301 I 0.760
XP_002933333 Xenopus tropicalis XP_002933333 I 0.760
Ocbimv22028516m.g Octopus bimaculoides Ocbimv22028516m.g I 0.760
Ocbimv22028510m.g Octopus bimaculoides Ocbimv22028510m.g I 0.760
tetur22g00570 Tetranychus urticae tetur22g00570 I 0.760
SPU_024189 Strongylocentrotus purpuratus SPU_024189 I 0.760
SPU_016114 Strongylocentrotus purpuratus SPU_016114 I 0.760
TriadG17488 Trichoplax adhaerens TriadG17488 I 0.760
Cmyd_10010806 Chelonia mydas Cmyd_10010806 I 0.760
Ocbimv22023102m.g Octopus bimaculoides Ocbimv22023102m.g I 0.760
Pvit_11839 Pogona vitticeps Pvit_11839 I 0.760
SPU_011280 Strongylocentrotus purpuratus SPU_011280 I 0.760
ENSSSCG00000029407 Sus scrofa ENSSSCG00000029407 I 0.760
SP8 Erinaceus europaeus ENSEEUG00000000621 I 0.760
SP8 Homo sapiens ENSG00000164651 D 0.760
SP9 Dasypus novemcinctus ENSDNOG00000019150 I 0.760
sp9 Danio rerio ENSDARG00000099374 I 0.760
sp8a Danio rerio ENSDARG00000011870 I 0.760
sp8b Danio rerio ENSDARG00000056666 I 0.760
SP9 Homo sapiens ENSG00000217236 D 0.760
SP9 Gasterosteus aculeatus ENSGACG00000004757 I 0.760
ENSGMOG00000008078 Gadus morhua ENSGMOG00000008078 I 0.760
ENSTGUG00000002679 Taeniopygia guttata ENSTGUG00000002679 I 0.760
ENSGMOG00000004590 Gadus morhua ENSGMOG00000004590 I 0.760
SP9 Gorilla gorilla ENSGGOG00000007345 I 0.760
sp8b Gasterosteus aculeatus ENSGACG00000008062 I 0.760
ENSCSAG00000014648 Chlorocebus sabaeus ENSCSAG00000014648 I 0.760
ENSCSAG00000013600 Chlorocebus sabaeus ENSCSAG00000013600 I 0.760
CGI_10007690 Crassostrea gigas CGI_10007690 I 0.760
DAPPUDRAFT_106303 Daphnia pulex DAPPUDRAFT_106303 I 0.760
CGI_10004780 Crassostrea gigas CGI_10004780 I 0.760
CapteG39158 Capitella teleta CapteG39158 I 0.760
CapteG224157 Capitella teleta CapteG224157 I 0.760
ENSAMXG00000004709 Astyanax mexicanus ENSAMXG00000004709 I 0.760
ENSAMXG00000015246 Astyanax mexicanus ENSAMXG00000015246 I 0.760
SP8 Callithrix jacchus ENSCJAG00000001245 I 0.760
SP8 Cavia porcellus ENSCPOG00000026910 I 0.760
SP9 Bos taurus ENSBTAG00000014949 I 0.760
SP8 Bos taurus ENSBTAG00000002604 I 0.760
ENSAMXG00000020011 Astyanax mexicanus ENSAMXG00000020011 I 0.760
ENSLACG00000018513 Latimeria chalumnae ENSLACG00000018513 I 0.760
ENSLACG00000005288 Latimeria chalumnae ENSLACG00000005288 I 0.760
SP9 Procavia capensis ENSPCAG00000012721 I 0.760
ENSPFOG00000007998 Poecilia formosa ENSPFOG00000007998 I 0.760
ENSPANG00000023061 Papio anubis ENSPANG00000023061 I 0.760
ENSPANG00000016221 Papio anubis ENSPANG00000016221 I 0.760
ENSONIG00000008657 Oreochromis niloticus ENSONIG00000008657 I 0.760
SP9 Oryzias latipes ENSORLG00000017492 I 0.760
ENSPFOG00000013459 Poecilia formosa ENSPFOG00000013459 I 0.760
ENSPPYG00000017747 Pongo abelii ENSPPYG00000017747 I 0.760
Sp9 Rattus norvegicus ENSRNOG00000028187 I 0.760
ENSSTOG00000028058 Ictidomys tridecemlineatus ENSSTOG00000028058 I 0.760
Sp8 Rattus norvegicus ENSRNOG00000005943 I 0.760
SP8 Pteropus vampyrus ENSPVAG00000005109 I 0.760
SP8 Pan troglodytes ENSPTRG00000018968 I 0.760
ENSONIG00000002896 Oreochromis niloticus ENSONIG00000002896 I 0.760
sp8b Oryzias latipes ENSORLG00000007242 I 0.760
SP8 Monodelphis domestica ENSMODG00000001375 I 0.760
SP9 Otolemur garnettii ENSOGAG00000034062 I 0.760
SP9 Macaca mulatta ENSMMUG00000023005 I 0.760
ENSLOCG00000011486 Lepisosteus oculatus ENSLOCG00000011486 I 0.760
SP8 Macaca mulatta ENSMMUG00000003722 I 0.760
SP9 Monodelphis domestica ENSMODG00000009303 I 0.760
ENSMPUG00000013919 Mustela putorius furo ENSMPUG00000013919 I 0.760
Sp9 Mus musculus ENSMUSG00000068859 I 0.760
ENSNLEG00000016729 Nomascus leucogenys ENSNLEG00000016729 I 0.760
ENSMEUG00000012808 Macropus eugenii ENSMEUG00000012808 I 0.760
Sp8 Mus musculus ENSMUSG00000048562 I 0.760
ENSLOCG00000007391 Lepisosteus oculatus ENSLOCG00000007391 I 0.760
TMUE_s0106000200 Trichuris muris TMUE_s0106000200 I 0.758
TTRE_0000693001 Trichuris trichiura TTRE_0000693001 I 0.758
D918_01017 Trichuris suis D918_01017 I 0.758
EFV52785 Trichinella spiralis EFV52785 I 0.758
D917_06327 Trichinella nativa D917_06327 I 0.758
Aan_R004593 Calypte anna Aan_R004593 I 0.757
sp5l Xenopus tropicalis XB-GENE-1000647 I 0.756
sp5l.S Xenopus laevis XB-GENE-6485591 I 0.756