D915_05082 (Fasciola hepatica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 D915_05082 T152775_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Klf12
M00787_2.00
Mus musculus
NNHMCRCCCH

DGGGYGKDNN
PBM
Weirauch et al.(2013)
pTH0977
0.771 0.725
Klf12
M02937_2.00
Mus musculus
GRCCACGCCCWHHHN

NDDDWGGGCGTGGYC
SELEX
Jolma et al.(2013)
Klf12_1
0.771 0.725
KLF12
M04430_2.00
Homo sapiens
DRCCACGCCCH

DGGGCGTGGYH
SELEX
Yin et al.(2017)
KLF12_FL_HT-SELEX
0.771 0.725
KLF12
M08299_2.00
Homo sapiens
SBNVGCCMCGCCCHB

VDGGGCGKGGCBNVS
ChIP-seq
Schmitges et al.(2016)
Q9Y4X4.MEME
0.771 0.725
KLF12
M08879_2.00
Homo sapiens
GCCCCGCCCYB

VRGGGCGGGGC
Misc
Kulakovskiy et al.(2013)
KLF12_HUMAN.H11MO.0.C
0.771 0.725
KLF12
M10186_2.00
Homo sapiens
HMYACDG

CHGTRKD
Transfac
Matys et al.(2006)
V$AP2REP_01
0.771 0.725
KLF12
M04431_2.00
Homo sapiens
RGSCGACGCCCN

NGGGCGTCGSCY
SELEX
Yin et al.(2017)
KLF12_FL_Methyl-HT-SELEX_1
0.771 0.725
KLF12
M04432_2.00
Homo sapiens
NRCCACGCCCH

DGGGCGTGGYN
SELEX
Yin et al.(2017)
KLF12_FL_Methyl-HT-SELEX_2
0.771 0.725
Klf7
M00134_2.00
Mus musculus
NHHMCRCCCH

DGGGYGKDDN
PBM
Badis et al.(2009)
Klf7_0974
0.767 0.739
KLF6
M04400_2.00
Homo sapiens
NVMCACRCCCH

DGGGYGTGKBN
SELEX
Yin et al.(2017)
KLF6_eDBD_HT-SELEX
0.767 0.739
KLF7
M08298_2.00
Homo sapiens
VVCHMCGCCCH

DGGGCGKDGBB
ChIP-seq
Schmitges et al.(2016)
O75840.MEME
0.767 0.739
KLF6
M08857_2.00
Homo sapiens
BYBYVNBCYMCDCCCYBBN

NVVRGGGHGKRGVNBRVRV
Misc
Kulakovskiy et al.(2013)
KLF6_HUMAN.H11MO.0.A
0.767 0.739
Klf6
M08962_2.00
Mus musculus
BYBYVNBCYMCDCCCYBBN

NVVRGGGHGKRGVNBRVRV
Misc
Kulakovskiy et al.(2013)
KLF6_MOUSE.H11MO.0.B
0.767 0.739
KLF6
M10113_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CPBP_Q6
0.767 0.739
KLF6
M04401_2.00
Homo sapiens
NRCCACGCCCH

DGGGCGTGGYN
SELEX
Yin et al.(2017)
KLF6_eDBD_Methyl-HT-SELEX
0.767 0.739
KLF3
M04418_2.00
Homo sapiens
RRCCRCGCCCH

DGGGCGYGGYY
SELEX
Yin et al.(2017)
KLF3_FL_HT-SELEX
0.764 0.710
KLF3
M08876_2.00
Homo sapiens
NSNNVCCMCRCCCHBBBBN

NVVVVDGGGYGKGGBNNSN
Misc
Kulakovskiy et al.(2013)
KLF3_HUMAN.H11MO.0.B
0.764 0.710
Klf3
M08982_2.00
Mus musculus
NSNNVCCMCRCCCHBBBBN

NVVVVDGGGYGKGGBNNSN
Misc
Kulakovskiy et al.(2013)
KLF3_MOUSE.H11MO.0.A
0.764 0.710
KLF3
M10172_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF3_Q3_01
0.764 0.710
KLF3
M10173_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF3_Q3
0.764 0.710
KLF3
M04419_2.00
Homo sapiens
DRCCACGCCCH

DGGGCGTGGYH
SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_1
0.764 0.710
KLF3
M04420_2.00
Homo sapiens
RRSCGCARCCCN

NGGGYTGCGSYY
SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_2
0.764 0.710
CG42741
M06169_2.00
Drosophila melanogaster
RCCACRCCCWHY

RDWGGGYGTGGY
B1H
Zhu et al.(2011)
CG9895_SANGER_10_FBgn0034810
0.761 0.739
CG42741
M06170_2.00
Drosophila melanogaster
VRCCACRCCCH

DGGGYGTGGYB
B1H
Zhu et al.(2011)
CG9895_SOLEXA_5_FBgn0034810
0.761 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
D915_05082 C2H2 ZF 637 661
D915_05082 C2H2 ZF 667 691
D915_05082 C2H2 ZF 697 719

Links

Other C2H2 ZF family TFs
Other Fasciola hepatica TFs

Invalid Input OrderBy

315 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action