TF Information

D917_03163 *(Trichinella nativa)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	D917_03163	T152851_2.00	WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
sob M03674_2.00	Drosophila melanogaster	RCTACYGNRTTACGCV	BGCGTAAYNCRGTAGY	SELEX Nitta et al.(2015) sob_1	0.760	0.783
sob M03675_2.00	Drosophila melanogaster	NGCGTAABNSNRGTAGY	RCTACYNSNVTTACGCN	SELEX Nitta et al.(2015) sob_2	0.760	0.783
sob M06088_2.00	Drosophila melanogaster	GCTWCTGBDNBDV	BHVNHVCAGWAGC	B1H Zhu et al.(2011) sob_SANGER_10_FBgn0004892	0.760	0.783
sob M06089_2.00	Drosophila melanogaster	BDGCTACYGKDBNN	NNVHMCRGTAGCHV	B1H Zhu et al.(2011) sob_SOLEXA_5_FBgn0004892	0.760	0.783
bowl M03676_2.00	Drosophila melanogaster	GCGTAABACNRGKAGYN	NRCTMCYNGTVTTACGC	SELEX Nitta et al.(2015) bowl_1	0.760	0.774
bowl M03677_2.00	Drosophila melanogaster	NGCTACYGTRTTACGCN	NGCGTAAYACRGTAGCN	SELEX Nitta et al.(2015) bowl_2	0.760	0.774
bowl M06090_2.00	Drosophila melanogaster	RCTWCYGK	MCRGWAGY	B1H Zhu et al.(2011) bowl_SANGER_5_FBgn0004893	0.760	0.774
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
D917_03163	C2H2 ZF	163	185	FICKYCQRRFTKSYNLLIHERTH
D917_03163	C2H2 ZF	191	213	YSCEICGKAFRRQDHLRDHRYIH
D917_03163	C2H2 ZF	219	241	FKCDICGKGFCQSRTMQVHRILH
D917_03163	C2H2 ZF	247	269	LQCPKCNRTFNQRSNLKTHLFTH
D917_03163	C2H2 ZF	275	299	FACPKAGCERGFRRTCDLRRHLSMH

Links
Other C2H2 ZF family TFs
Other *Trichinella nativa* TFs

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69 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action