CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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D917_04525
(
Trichinella nativa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
D917_04525
T152870_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
D917_04525
C2H2 ZF
32
55
FSCVRCQKWFNTSHGLEVHVRRAH
D917_04525
C2H2 ZF
61
83
FACEKCNKTFGHEISLTQHRSTH
D917_04525
C2H2 ZF
89
111
FECSQCGKVFKRSSTLSTHLMIH
D917_04525
C2H2 ZF
117
139
YACPYCDKRFHQKSDMKKHTYIH
D917_04525
C2H2 ZF
145
167
HKCKICGKAFSQSSNLITHTRKH
D917_04525
C2H2 ZF
173
196
FVCGLCGRAFQRKVDFRRHEDSHH
Links
Other
C2H2 ZF
family TFs
Other
Trichinella nativa
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NV12917
Nasonia vitripennis
NV12917
I
0.770
GB40142
Apis mellifera
GB40142
I
0.770
DAPPUDRAFT_113216
Daphnia pulex
DAPPUDRAFT_113216
N
0.768
PHUM248200
Pediculus humanus
PHUM248200
I
0.766
TC012906
Tribolium castaneum
TC012906
I
0.764
ACYPI001809
Acyrthosiphon pisum
ACYPI001809
N
0.763
TMUE_s0128002800
Trichuris muris
TMUE_s0128002800
I
0.762
TTRE_0000385401
Trichuris trichiura
TTRE_0000385401
I
0.756
D918_06477
Trichuris suis
D918_06477
I
0.756