CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DICVIV_00143
(
Dictyocaulus viviparus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
DICVIV_00143
T152978_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
bcl-11
M00641_2.00
Caenorhabditis elegans
NNTGACCRNN
NNYGGTCANN
PBM
Narasimhan et al.(2015)
pTH10807
0.765
0.918
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
DICVIV_00143
C2H2 ZF
406
421
LVFTNRSNLIVHLRSH
DICVIV_00143
C2H2 ZF
427
449
YQCKLCPYACAQSSKLTRHMRTH
DICVIV_00143
C2H2 ZF
457
478
YRCYICQMPFSVHSTLEKHMRK
Links
Other
C2H2 ZF
family TFs
Other
Dictyocaulus viviparus
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy