CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DICVIV_08037
(
Dictyocaulus viviparus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
DICVIV_08037
T153026_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
odd-2
M00618_2.00
Caenorhabditis elegans
NGCTACYGK
MCRGTAGCN
PBM
Narasimhan et al.(2015)
pTH9150
0.790
0.884
Osr2
M00132_2.00
Mus musculus
NGCTWCYGNN
NNCRGWAGCN
PBM
Badis et al.(2009)
Osr2_1727
0.763
0.797
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
DICVIV_08037
C2H2 ZF
130
152
FICKYCNRHFTKSYNLLIHERTH
DICVIV_08037
C2H2 ZF
158
180
YSCDTCGKAFRRQDHLRDHKFIH
DICVIV_08037
C2H2 ZF
186
208
FKCDVCDKGFCQSRTLQVHRASH
Links
Other
C2H2 ZF
family TFs
Other
Dictyocaulus viviparus
TFs
69 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy