CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
DME_0000423301
(
Dracunculus medinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
DME_0000423301
T153138_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sptf-3
M00632_2.00
Caenorhabditis elegans
NNMCGCCCMY
RKGGGCGKNN
PBM
Narasimhan et al.(2015)
pTH9394
0.784
0.884
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
DME_0000423301-mRNA-1
C2H2 ZF
176
198
HVCHICDKTYGKTSHLRAHLRGH
DME_0000423301-mRNA-1
C2H2 ZF
204
228
FACDWPHCQKRFTRSDELQRHRRTH
DME_0000423301-mRNA-1
C2H2 ZF
234
256
FSCGQCGKKFMRSDHLTKHERTH
Links
Other
C2H2 ZF
family TFs
Other
Dracunculus medinensis
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy