CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DME_0000608401
(
Dracunculus medinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
DME_0000608401
T153148_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Blimp-1
M03692_2.00
Drosophila melanogaster
NNYACTTTCVYYN
NRRBGAAAGTRNN
SELEX
Nitta et al.(2015)
Blimp-1_1
0.783
0.868
Blimp-1
M06141_2.00
Drosophila melanogaster
ACTTTCACTTTY
RAAAGTGAAAGT
B1H
Zhu et al.(2011)
Blimp-1_NAR_FBgn0035625
0.783
0.868
Blimp-1
M06142_2.00
Drosophila melanogaster
RCTTTCMCTTTY
RAAAGKGAAAGY
B1H
Zhu et al.(2011)
Blimp-1_SANGER_5_FBgn0035625
0.783
0.868
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
DME_0000608401-mRNA-1
C2H2 ZF
553
575
YECKECNKTFGQLSNLKVHLRTH
DME_0000608401-mRNA-1
C2H2 ZF
581
603
FKCNVCMKEFTQLAHLQKHHLVH
DME_0000608401-mRNA-1
C2H2 ZF
609
631
HQCEICQKRFSSTSNLKTHLRLH
DME_0000608401-mRNA-1
C2H2 ZF
637
659
YSCDLCSTKFTQFVHLKLHKRLH
DME_0000608401-mRNA-1
C2H2 ZF
665
686
YTCSGCGKKYISPSGLRTHWKS
Links
Other
C2H2 ZF
family TFs
Other
Dracunculus medinensis
TFs
77 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy