CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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EmuJ_000711000
(
Echinococcus multilocularis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
EmuJ_000711000
T153424_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ci
M03672_2.00
Drosophila melanogaster
NCGMCCACMN
NKGTGGKCGN
SELEX
Nitta et al.(2015)
ci_1
0.784
0.835
ci
M06084_2.00
Drosophila melanogaster
RGMCCACMCAC
GTGKGTGGKCY
B1H
Zhu et al.(2011)
Ci_SANGER_5_FBgn0004859
0.784
0.835
ci
M02644_2.00
Drosophila melanogaster
GACCACCCAMG
CKTGGGTGGTC
SELEX
Hallikas et al.(2006)
Ci
0.784
0.835
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EmuJ_000711000
C2H2 ZF
739
764
TTCRWGSCQCQFDSQDELVKHISNEH
EmuJ_000711000
C2H2 ZF
772
799
FVCFWRECVRGARPFKAQYMLVVHMRRH
EmuJ_000711000
C2H2 ZF
805
829
HKCIFDGCSKRYSRLENLKTHLRSH
EmuJ_000711000
C2H2 ZF
835
860
YQCEVPGCNKAFSNASDRAKHQNRTH
EmuJ_000711000
C2H2 ZF
866
891
YVCKVIGCSKRYTDPSSLRKHVKTVH
Links
Other
C2H2 ZF
family TFs
Other
Echinococcus multilocularis
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy