genemark-nMf.1.1.scaf00614-processed-gene-0.3 (Meloidogyne floridensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 genemark-nMf.1.1.scaf00614-processed-gene-0.3 T153531_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
genemark-nMf.1.1.scaf00614-processed-gene-0.3-mRNA-1 C2H2 ZF 371 393
genemark-nMf.1.1.scaf00614-processed-gene-0.3-mRNA-1 C2H2 ZF 396 418
genemark-nMf.1.1.scaf00614-processed-gene-0.3-mRNA-1 C2H2 ZF 423 445

Links

Other C2H2 ZF family TFs
Other Meloidogyne floridensis TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Minc13467 Meloidogyne incognita Minc13467 N 0.827
MhA1_Contig343.frz3.gene9 Meloidogyne hapla MhA1_Contig343.frz3.gene9 N 0.803
GPLIN_000681800 Globodera pallida GPLIN_000681800 N 0.766