GPLIN_000570600 (Globodera pallida)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 GPLIN_000570600 T153567_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
sptf-3
M00632_2.00
Caenorhabditis elegans
NNMCGCCCMY

RKGGGCGKNN
PBM
Narasimhan et al.(2015)
pTH9394
0.784 0.855
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_000570600 C2H2 ZF 231 253
GPLIN_000570600 C2H2 ZF 259 283
GPLIN_000570600 C2H2 ZF 289 311

Links

Other C2H2 ZF family TFs
Other Globodera pallida TFs

Invalid Input OrderBy

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action