GPLIN_001288500 (Globodera pallida)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 GPLIN_001288500 T153611_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
bcl-11
M00641_2.00
Caenorhabditis elegans
NNTGACCRNN

NNYGGTCANN
PBM
Narasimhan et al.(2015)
pTH10807
0.800 0.897
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_001288500 C2H2 ZF 675 697
GPLIN_001288500 C2H2 ZF 703 725
GPLIN_001288500 C2H2 ZF 733 754

Links

Other C2H2 ZF family TFs
Other Globodera pallida TFs

Invalid Input OrderBy

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action