CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPUH_0001498901
(
Gongylonema pulchrum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
GPUH_0001498901
T153677_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPUH_0001498901-mRNA-1
C2H2 ZF
33
57
HECGHPGCCKRYNKSSHLKAHMRTH
GPUH_0001498901-mRNA-1
C2H2 ZF
63
87
YSCNWPSCHWKFARSDELTRHYRKH
GPUH_0001498901-mRNA-1
C2H2 ZF
93
115
FNCTLCERSFSRSDHLNLHMKRH
Links
Other
C2H2 ZF
family TFs
Other
Gongylonema pulchrum
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GPUH_0002567601
Gongylonema pulchrum
GPUH_0002567601
N
0.827
WBGene00246545
Onchocerca volvulus
WBGene00246545
N
0.808
nDi.2.2.2.g03895
Dirofilaria immitis
nDi.2.2.2.g03895
N
0.808
EEL_0000852101
Elaeophora elaphi
EEL_0000852101
I
0.804
nAv.1.0.1.g05136
Acanthocheilonema viteae
nAv.1.0.1.g05136
I
0.798
ASIM_0000327401
Anisakis simplex
ASIM_0000327401
I
0.791
ASIM_0001887501
Anisakis simplex
ASIM_0001887501
I
0.791
ALUE_0001029501
Ascaris lumbricoides
ALUE_0001029501
I
0.787
ASU_13892
Ascaris suum
ASU_13892
I
0.787
LOAG_17097
Loa loa
LOAG_17097
N
0.778
ENSAMXG00000010015
Astyanax mexicanus
ENSAMXG00000010015
I
0.771
TCLT_0000033501
Thelazia callipaeda
TCLT_0000033501
I
0.768
SNAPOd2T00013472001
Oikopleura dioica
SNAPOd2T00013472001
I
0.768
ENSXMAG00000005126
Xiphophorus maculatus
ENSXMAG00000005126
I
0.768
ENSPFOG00000012141
Poecilia formosa
ENSPFOG00000012141
I
0.768
Ppa-klf-1
Pristionchus pacificus
PPA04120
I
0.764
CapteG137485
Capitella teleta
CapteG137485
I
0.764
SNAPOd2T00000985001
Oikopleura dioica
SNAPOd2T00000985001
I
0.763
KGM_11423
Danaus plexippus
KGM_11423
I
0.761
MCINX007305
Melitaea cinxia
MCINX007305
I
0.761
NECAME_14309
Necator americanus
NECAME_14309
I
0.760
TELCIR_10559
Teladorsagia circumcincta
TELCIR_10559
I
0.760
SVUK_0000441401
Strongylus vulgaris
SVUK_0000441401
I
0.760
OESDEN_17037
Oesophagostomum dentatum
OESDEN_17037
I
0.760
OESDEN_16972
Oesophagostomum dentatum
OESDEN_16972
I
0.760
ANCCEY_14830
Ancylostoma ceylanicum
ANCCEY_14830
I
0.760
ACOC_0001094901
Angiostrongylus costaricensis
ACOC_0001094901
I
0.760
ACAC_0001381401
Angiostrongylus cantonensis
ACAC_0001381401
I
0.760
ANCCAN_11801
Ancylostoma caninum
ANCCAN_11801
I
0.760
DICVIV_12136
Dictyocaulus viviparus
DICVIV_12136
I
0.760
HCOI00991800
Haemonchus contortus
HCOI00991800
I
0.760
HCOI00361200
Haemonchus contortus
HCOI00361200
I
0.760
HPLM_0001005201
Haemonchus placei
HPLM_0001005201
I
0.760
BGIBMGA011419
Bombyx mori
BGIBMGA011419
I
0.757