CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPUH_0002682501
(
Gongylonema pulchrum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
GPUH_0002682501
T153731_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPUH_0002682501-mRNA-1
C2H2 ZF
6
28
FHCKKCAYSCVNKSMLNSHMKSH
GPUH_0002682501-mRNA-1
C2H2 ZF
34
58
FRCRDCTYATKYCHSLKLHLRKYNH
Links
Other
C2H2 ZF
family TFs
Other
Gongylonema pulchrum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LotgiG129892
Lottia gigantea
LotgiG129892
N
0.793
SMTD_0002105601
Schistosoma mattheei
SMTD_0002105601
N
0.777
D915_00264
Fasciola hepatica
D915_00264
N
0.777
ECPE_0000414501
Echinostoma caproni
ECPE_0000414501
N
0.777