CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Hba_14230
(
Heterorhabditis bacteriophora
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Hba_14230
T153757_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
pat-9
M00620_2.00
Caenorhabditis elegans
NDKTKTAAHN
NDTTAMAMHN
PBM
Narasimhan et al.(2015)
pTH10808
0.821
0.913
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Hba_14230
C2H2 ZF
149
171
YPCNLCPSRFGSKMELEEHQNSH
Hba_14230
C2H2 ZF
177
199
FECDVCKARFNRRSTLWNHKRIH
Links
Other
C2H2 ZF
family TFs
Other
Heterorhabditis bacteriophora
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy