HCOI00075700 (Haemonchus contortus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 HCOI00075700 T153781_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
klf-3
M00617_2.00
Caenorhabditis elegans
NHMCGCCCH

DGGGCGKDN
PBM
Narasimhan et al.(2015)
pTH9072
0.784 0.812
KLF2
M04455_2.00
Homo sapiens
NVCCMCRCCCH

DGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF2_eDBD_HT-SELEX
0.772 0.841
KLF2
M10210_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LKLF_Q3
0.772 0.841
KLF2
M10211_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LKLF_Q6
0.772 0.841
KLF2
M04456_2.00
Homo sapiens
NVCCMCRCCCN

NGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF2_eDBD_Methyl-HT-SELEX
0.772 0.841
KLF4
M04463_2.00
Homo sapiens
NVCCACRCCCH

DGGGYGTGGBN
SELEX
Yin et al.(2017)
KLF4_eDBD_HT-SELEX
0.768 0.826
KLF4
M08091_2.00
Homo sapiens
MCACACCCWNN

NNWGGGTGTGK
ChIP-seq
Mathelier et al.(2014)
MA0039.3
0.768 0.826
Klf4
M08021_2.00
Mus musculus
VRCCMCRCCCH

DGGGYGKGGYB
ChIP-seq
Chen et al.(2011)
SRP000217_Klf4
0.768 0.826
KLF4
M08243_2.00
Homo sapiens
RCCMCRCCCH

DGGGYGKGGY
ChIP-seq
Najafabadi et al.(2015b)
KLF14
0.768 0.826
KLF4
M08894_2.00
Homo sapiens
RCCMCRCCCH

DGGGYGKGGY
Misc
Kulakovskiy et al.(2013)
KLF4_HUMAN.H11MO.0.A
0.768 0.826
Klf4
M08964_2.00
Mus musculus
GCCMCRCCCWBYBBN

NVVRVWGGGYGKGGC
Misc
Kulakovskiy et al.(2013)
KLF4_MOUSE.H11MO.0.A
0.768 0.826
KLF4
M10217_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_02
0.768 0.826
KLF4
M10218_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q3_01
0.768 0.826
KLF4
M10219_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q3
0.768 0.826
KLF4
M10220_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q4
0.768 0.826
KLF4
M04464_2.00
Homo sapiens
NVCCMCRCCCN

NGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF4_eDBD_Methyl-HT-SELEX
0.768 0.826
KLF3
M04418_2.00
Homo sapiens
RRCCRCGCCCH

DGGGCGYGGYY
SELEX
Yin et al.(2017)
KLF3_FL_HT-SELEX
0.768 0.783
KLF3
M08876_2.00
Homo sapiens
NSNNVCCMCRCCCHBBBBN

NVVVVDGGGYGKGGBNNSN
Misc
Kulakovskiy et al.(2013)
KLF3_HUMAN.H11MO.0.B
0.768 0.783
Klf3
M08982_2.00
Mus musculus
NSNNVCCMCRCCCHBBBBN

NVVVVDGGGYGKGGBNNSN
Misc
Kulakovskiy et al.(2013)
KLF3_MOUSE.H11MO.0.A
0.768 0.783
KLF3
M10172_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF3_Q3_01
0.768 0.783
KLF3
M10173_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF3_Q3
0.768 0.783
KLF3
M04419_2.00
Homo sapiens
DRCCACGCCCH

DGGGCGTGGYH
SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_1
0.768 0.783
KLF3
M04420_2.00
Homo sapiens
RRSCGCARCCCN

NGGGYTGCGSYY
SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_2
0.768 0.783
KLF5
M04410_2.00
Homo sapiens
NMCACRCCCH

DGGGYGTGKN
SELEX
Yin et al.(2017)
KLF5_eDBD_HT-SELEX
0.768 0.768
KLF5
M08086_2.00
Homo sapiens
BCCMCDCCCH

DGGGHGKGGV
ChIP-seq
Mathelier et al.(2014)
MA0599.1
0.768 0.768
KLF5
M08868_2.00
Homo sapiens
NHVNRCCMCDCCCH

DGGGHGKGGYNBDN
Misc
Kulakovskiy et al.(2013)
KLF5_HUMAN.H11MO.0.A
0.768 0.768
Klf5
M08965_2.00
Mus musculus
KCCMCDCCCHBBBCH

DGVVVDGGGHGKGGM
Misc
Kulakovskiy et al.(2013)
KLF5_MOUSE.H11MO.0.A
0.768 0.768
KLF5
M09502_2.00
Homo sapiens
GCCMCRCCCH

DGGGYGKGGC
Misc
Heinz et al.(2010)
LoVo-KLF5_GSE49402
0.768 0.768
KLF5
M10149_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BTEB2_Q3_01
0.768 0.768
KLF5
M10150_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BTEB2_Q3
0.768 0.768
KLF5
M04411_2.00
Homo sapiens
NMCACRCCYH

DRGGYGTGKN
SELEX
Yin et al.(2017)
KLF5_eDBD_Methyl-HT-SELEX
0.768 0.768
CG42741
M06169_2.00
Drosophila melanogaster
RCCACRCCCWHY

RDWGGGYGTGGY
B1H
Zhu et al.(2011)
CG9895_SANGER_10_FBgn0034810
0.762 0.768
CG42741
M06170_2.00
Drosophila melanogaster
VRCCACRCCCH

DGGGYGTGGYB
B1H
Zhu et al.(2011)
CG9895_SOLEXA_5_FBgn0034810
0.762 0.768
Klf1
M08099_2.00
Mus musculus
NRCCACACCCW

WGGGTGTGGYN
ChIP-seq
Mathelier et al.(2014)
MA0493.1
0.759 0.797
Klf1
M09008_2.00
Mus musculus
MVMNSCCMCRCCCH

DGGGYGKGGSNKBK
Misc
Kulakovskiy et al.(2013)
KLF1_MOUSE.H11MO.0.A
0.759 0.797
Klf1
M09516_2.00
Mus musculus
DRCCACACCCWN

NWGGGTGTGGYH
Misc
Heinz et al.(2010)
Erythrocyte-Klf1_GSE20478
0.759 0.797
KLF6
M04400_2.00
Homo sapiens
NVMCACRCCCH

DGGGYGTGKBN
SELEX
Yin et al.(2017)
KLF6_eDBD_HT-SELEX
0.759 0.812
KLF6
M08857_2.00
Homo sapiens
BYBYVNBCYMCDCCCYBBN

NVVRGGGHGKRGVNBRVRV
Misc
Kulakovskiy et al.(2013)
KLF6_HUMAN.H11MO.0.A
0.759 0.812
Klf6
M08962_2.00
Mus musculus
BYBYVNBCYMCDCCCYBBN

NVVRGGGHGKRGVNBRVRV
Misc
Kulakovskiy et al.(2013)
KLF6_MOUSE.H11MO.0.B
0.759 0.812
KLF6
M10113_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CPBP_Q6
0.759 0.812
KLF6
M04401_2.00
Homo sapiens
NRCCACGCCCH

DGGGCGTGGYN
SELEX
Yin et al.(2017)
KLF6_eDBD_Methyl-HT-SELEX
0.759 0.812
KLF1
M00226_2.00
Homo sapiens
CMCGCCCM

KGGGCGKG
PBM
Barrera et al.(2016)
KLF1_REF
0.756 0.783
KLF1
M08293_2.00
Homo sapiens
NVNNNRCCMCRCCCH

DGGGYGKGGYNNNBN
ChIP-seq
Schmitges et al.(2016)
Q13351.MEME
0.756 0.783
KLF1
M08871_2.00
Homo sapiens
SVNDGCCMCRCCCH

DGGGYGKGGCHNBS
Misc
Kulakovskiy et al.(2013)
KLF1_HUMAN.H11MO.0.A
0.756 0.783
KLF1
M10163_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EKLF_Q5_01
0.756 0.783
KLF1
M10164_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EKLF_Q5
0.756 0.783
KLF1
M00224_2.00
Homo sapiens
YMCGCCCH

DGGGCGKR
PBM
Barrera et al.(2016)
KLF1_H299Y
0.756 0.768
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI00075700.t1 C2H2 ZF 215 239
HCOI00075700.t1 C2H2 ZF 245 269
HCOI00075700.t1 C2H2 ZF 275 297

Links

Other C2H2 ZF family TFs
Other Haemonchus contortus TFs

Invalid Input OrderBy

511 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action