HCOI00760100 (Haemonchus contortus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 HCOI00760100 T153817_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
blmp-1
M08103_2.00 		Caenorhabditis elegans
YTYTCHYTTTY
RAAARDGARAR		 ChIP-seq
Mathelier et al.(2014)
MA0537.1 		0.797 0.904
blmp-1
M08195_2.00 		Caenorhabditis elegans
VACTTTCDCY
RGHGAAAGTB		 ChIP-seq
Contrino et al.(2012)
Mw137 		0.797 0.904
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI00760100.t1 C2H2 ZF 487 509
HCOI00760100.t1 C2H2 ZF 515 537
HCOI00760100.t1 C2H2 ZF 543 565
HCOI00760100.t1 C2H2 ZF 571 593
HCOI00760100.t1 C2H2 ZF 599 620
HCOI00760100.t2 C2H2 ZF 486 508
HCOI00760100.t2 C2H2 ZF 514 536
HCOI00760100.t2 C2H2 ZF 542 564
HCOI00760100.t2 C2H2 ZF 570 592
HCOI00760100.t2 C2H2 ZF 598 619

Links

Other C2H2 ZF family TFs
Other Haemonchus contortus TFs

Invalid Input OrderBy

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action