HmN_000840400 (Hymenolepis microstoma)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 HmN_000840400 T154059_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ci
M03672_2.00
Drosophila melanogaster
NCGMCCACMN

NKGTGGKCGN
SELEX
Nitta et al.(2015)
ci_1
0.784 0.835
ci
M06084_2.00
Drosophila melanogaster
RGMCCACMCAC

GTGKGTGGKCY
B1H
Zhu et al.(2011)
Ci_SANGER_5_FBgn0004859
0.784 0.835
ci
M02644_2.00
Drosophila melanogaster
GACCACCCAMG

CKTGGGTGGTC
SELEX
Hallikas et al.(2006)
Ci
0.784 0.835
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HmN_000840400 C2H2 ZF 714 739
HmN_000840400 C2H2 ZF 747 774
HmN_000840400 C2H2 ZF 780 804
HmN_000840400 C2H2 ZF 810 835
HmN_000840400 C2H2 ZF 841 866

Links

Other C2H2 ZF family TFs
Other Hymenolepis microstoma TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TsM_000018800 Taenia solium TsM_000018800 I 0.823
EmuJ_000711000 Echinococcus multilocularis EmuJ_000711000 I 0.820
B_00892 Schistosoma haematobium B_00892 I 0.806
Sjc_0091950 Schistosoma japonicum Sjc_0091950 I 0.796
ACUA017715 Anopheles culicifacies ACUA017715 I 0.794
ADIR005874 Anopheles dirus ADIR005874 I 0.794
ACHR002736 Anopheles christyi ACHR002736 I 0.794
AALB008266 Anopheles albimanus AALB008266 I 0.794
LCUP015520 Lucilia cuprina LCUP015520 I 0.794
AFAF006125 Anopheles farauti AFAF006125 I 0.794
AATE009625 Anopheles atroparvus AATE009625 I 0.794
AMIN000086 Anopheles minimus AMIN000086 I 0.794
ADAC002075 Anopheles darlingi ADAC002075 I 0.794
AAEL012039 Aedes aegypti AAEL012039 I 0.794
AGAP004637 Anopheles gambiae AGAP004637 I 0.794
ASTEI06951 Anopheles stephensi ASTEI06951 I 0.794
AMAM007692 Anopheles maculatus AMAM007692 I 0.794
ASIS001386 Anopheles sinensis ASIS001386 I 0.794
AFUN004511 Anopheles funestus AFUN004511 I 0.794
TC003000 Tribolium castaneum TC003000 I 0.792
CpipJ_CPIJ000614 Culex pipiens CpipJ_CPIJ000614 I 0.792
GL18388 Drosophila persimilis FBgn0155989 I 0.792
GA27838 Drosophila pseudoobscura FBgn0249202 I 0.792
CPIJ000614 Culex quinquefasciatus CPIJ000614 I 0.792
GH23992 Drosophila grimshawi FBgn0131449 I 0.787
ci Drosophila simulans FBgn0012866 I 0.784
ci Drosophila yakuba FBgn0022826 I 0.784
GG16466 Drosophila erecta FBgn0108697 I 0.784
GM23237 Drosophila sechellia FBgn0178104 I 0.784
GK13666 Drosophila willistoni FBgn0215674 I 0.784
GJ14655 Drosophila virilis FBgn0201862 I 0.784
ci Drosophila melanogaster FBgn0004859 D 0.784
GI14119 Drosophila mojavensis FBgn0136873 I 0.777
LotgiG119241 Lottia gigantea LotgiG119241 I 0.775
T265_14352 Opisthorchis viverrini T265_14352 N 0.764
csin105947 Clonorchis sinensis csin105947 N 0.764