L596_g11489 (Steinernema carpocapsae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 L596_g11489 T154307_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
klu-2
M00645_2.00 		Caenorhabditis elegans
NNCCCMCKYN
NRMGKGGGNN		 PBM
Narasimhan et al.(2015)
pTH9354 		0.764 0.797
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L596_g11489.t1 C2H2 ZF 356 378
L596_g11489.t1 C2H2 ZF 384 406
L596_g11489.t1 C2H2 ZF 412 435
L596_g11489.t2 C2H2 ZF 427 449
L596_g11489.t2 C2H2 ZF 455 477
L596_g11489.t2 C2H2 ZF 483 506

Links

Other C2H2 ZF family TFs
Other Steinernema carpocapsae TFs

Invalid Input OrderBy

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action