CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L596_g14520
(
Steinernema carpocapsae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
L596_g14520
T154314_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
bcl-11
M00641_2.00
Caenorhabditis elegans
NNTGACCRNN
NNYGGTCANN
PBM
Narasimhan et al.(2015)
pTH10807
0.824
0.926
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L596_g14520.t1
C2H2 ZF
591
613
DRCQFCHKVFTNRSNLIVHLRSH
L596_g14520.t1
C2H2 ZF
619
641
YKCQLCPYACAQSSKLTRHMRTH
L596_g14520.t1
C2H2 ZF
649
670
FHCYICQMPFSVHSTLEKHMRK
L596_g14520.t2
C2H2 ZF
609
631
DRCQFCHKVFTNRSNLIVHLRSH
L596_g14520.t2
C2H2 ZF
637
659
YKCQLCPYACAQSSKLTRHMRTH
L596_g14520.t2
C2H2 ZF
667
688
FHCYICQMPFSVHSTLEKHMRK
L596_g14520.t3
C2H2 ZF
613
635
DRCQFCHKVFTNRSNLIVHLRSH
L596_g14520.t3
C2H2 ZF
641
663
YKCQLCPYACAQSSKLTRHMRTH
L596_g14520.t3
C2H2 ZF
671
692
FHCYICQMPFSVHSTLEKHMRK
Links
Other
C2H2 ZF
family TFs
Other
Steinernema carpocapsae
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy