L596_g22597 (Steinernema carpocapsae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 L596_g22597 T154363_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CG42741
M06169_2.00
Drosophila melanogaster
RCCACRCCCWHY

RDWGGGYGTGGY
B1H
Zhu et al.(2011)
CG9895_SANGER_10_FBgn0034810
0.762 0.806
CG42741
M06170_2.00
Drosophila melanogaster
VRCCACRCCCH

DGGGYGTGGYB
B1H
Zhu et al.(2011)
CG9895_SOLEXA_5_FBgn0034810
0.762 0.806
KLF2
M04455_2.00
Homo sapiens
NVCCMCRCCCH

DGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF2_eDBD_HT-SELEX
0.758 0.806
KLF2
M10210_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LKLF_Q3
0.758 0.806
KLF2
M10211_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LKLF_Q6
0.758 0.806
KLF2
M04456_2.00
Homo sapiens
NVCCMCRCCCN

NGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF2_eDBD_Methyl-HT-SELEX
0.758 0.806
KLF4
M04463_2.00
Homo sapiens
NVCCACRCCCH

DGGGYGTGGBN
SELEX
Yin et al.(2017)
KLF4_eDBD_HT-SELEX
0.758 0.806
KLF4
M08091_2.00
Homo sapiens
MCACACCCWNN

NNWGGGTGTGK
ChIP-seq
Mathelier et al.(2014)
MA0039.3
0.758 0.806
Klf4
M08021_2.00
Mus musculus
VRCCMCRCCCH

DGGGYGKGGYB
ChIP-seq
Chen et al.(2011)
SRP000217_Klf4
0.758 0.806
KLF4
M08894_2.00
Homo sapiens
RCCMCRCCCH

DGGGYGKGGY
Misc
Kulakovskiy et al.(2013)
KLF4_HUMAN.H11MO.0.A
0.758 0.806
Klf4
M08964_2.00
Mus musculus
GCCMCRCCCWBYBBN

NVVRVWGGGYGKGGC
Misc
Kulakovskiy et al.(2013)
KLF4_MOUSE.H11MO.0.A
0.758 0.806
KLF4
M10217_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_02
0.758 0.806
KLF4
M10218_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q3_01
0.758 0.806
KLF4
M10219_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q3
0.758 0.806
KLF4
M10220_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q4
0.758 0.806
KLF4
M04464_2.00
Homo sapiens
NVCCMCRCCCN

NGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF4_eDBD_Methyl-HT-SELEX
0.758 0.806
KLF6
M04400_2.00
Homo sapiens
NVMCACRCCCH

DGGGYGTGKBN
SELEX
Yin et al.(2017)
KLF6_eDBD_HT-SELEX
0.758 0.774
KLF6
M08857_2.00
Homo sapiens
BYBYVNBCYMCDCCCYBBN

NVVRGGGHGKRGVNBRVRV
Misc
Kulakovskiy et al.(2013)
KLF6_HUMAN.H11MO.0.A
0.758 0.774
Klf6
M08962_2.00
Mus musculus
BYBYVNBCYMCDCCCYBBN

NVVRGGGHGKRGVNBRVRV
Misc
Kulakovskiy et al.(2013)
KLF6_MOUSE.H11MO.0.B
0.758 0.774
KLF6
M10113_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CPBP_Q6
0.758 0.774
KLF6
M04401_2.00
Homo sapiens
NRCCACGCCCH

DGGGCGTGGYN
SELEX
Yin et al.(2017)
KLF6_eDBD_Methyl-HT-SELEX
0.758 0.774
KLF4
M08243_2.00
Homo sapiens
RCCMCRCCCH

DGGGYGKGGY
ChIP-seq
Najafabadi et al.(2015b)
KLF14
0.758 0.725
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L596_g22597.t1 C2H2 ZF 2 17
L596_g22597.t1 C2H2 ZF 23 47
L596_g22597.t1 C2H2 ZF 53 75

Links

Other C2H2 ZF family TFs
Other Steinernema carpocapsae TFs

Invalid Input OrderBy

261 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action