CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
L596_g24640
(
Steinernema carpocapsae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
L596_g24640
T154369_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L596_g24640.t1
C2H2 ZF
200
227
FVCRWAGCFRKQRPFTALYMLVTHVRRH
L596_g24640.t1
C2H2 ZF
233
257
HCCTFPGCMKAYGRLENLKTHIRTH
L596_g24640.t1
C2H2 ZF
263
288
YKCEVPECGKAFSNASDRAKHQTRTH
L596_g24640.t1
C2H2 ZF
294
320
YVCPFIDACEKSYTDPSSLRKHIKTVH
L596_g24640.t2
C2H2 ZF
200
227
FVCRWAGCFRKQRPFTALYMLVTHVRRH
L596_g24640.t2
C2H2 ZF
233
257
HCCTFPGCMKAYGRLENLKTHIRTH
L596_g24640.t2
C2H2 ZF
263
288
YKCEVPECGKAFSNASDRAKHQTRTH
L596_g24640.t2
C2H2 ZF
294
320
YVCPFIDACEKSYTDPSSLRKHIKTVH
L596_g24640.t3
C2H2 ZF
200
227
FVCRWAGCFRKQRPFTALYMLVTHVRRH
L596_g24640.t3
C2H2 ZF
233
257
HCCTFPGCMKAYGRLENLKTHIRTH
L596_g24640.t3
C2H2 ZF
263
288
YKCEVPECGKAFSNASDRAKHQTRTH
L596_g24640.t3
C2H2 ZF
294
320
YVCPFIDACEKSYTDPSSLRKHIKTVH
Links
Other
C2H2 ZF
family TFs
Other
Steinernema carpocapsae
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L892_g13049
Steinernema scapterisci
L892_g13049
N
0.827
L898_g35391
Steinernema monticolum
L898_g35391
N
0.824
L893_g170
Steinernema glaseri
L893_g170
N
0.812
L889_g9311
Steinernema feltiae
L889_g9311
N
0.812
L889_g13709
Steinernema feltiae
L889_g13709
N
0.774
L596_g4035
Steinernema carpocapsae
L596_g4035
N
0.768
L893_g3120
Steinernema glaseri
L893_g3120
N
0.762
L596_g20067
Steinernema carpocapsae
L596_g20067
N
0.762