CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
L889_g19350
(
Steinernema feltiae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
L889_g19350
T154431_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
bcl-11
M00641_2.00
Caenorhabditis elegans
NNTGACCRNN
NNYGGTCANN
PBM
Narasimhan et al.(2015)
pTH10807
0.824
0.913
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L889_g19350.t1
C2H2 ZF
605
627
DRCQFCHKVFTNRSNLIVHLRSH
L889_g19350.t1
C2H2 ZF
633
655
YKCQLCPYACAQSSKLTRHMRTH
L889_g19350.t1
C2H2 ZF
663
688
FHCYICQMPFSVHSTLEKHMRKCVVH
L889_g19350.t2
C2H2 ZF
584
606
DRCQFCHKVFTNRSNLIVHLRSH
L889_g19350.t2
C2H2 ZF
612
634
YKCQLCPYACAQSSKLTRHMRTH
L889_g19350.t2
C2H2 ZF
642
667
FHCYICQMPFSVHSTLEKHMRKCVVH
Links
Other
C2H2 ZF
family TFs
Other
Steinernema feltiae
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy