CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L893_g11388
(
Steinernema glaseri
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
L893_g11388
T154626_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
lsy-2
M00615_2.00
Caenorhabditis elegans
NTACMGTANN
NNTACKGTAN
PBM
Narasimhan et al.(2015)
pTH10810
0.781
0.913
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L893_g11388.t1
C2H2 ZF
169
191
HQCNICNKIFVSFKGLQQHAVIH
L893_g11388.t1
C2H2 ZF
197
219
FGCDICGKSFRFKSNLFEHRSVH
L893_g11388.t1
C2H2 ZF
225
247
HACPYCGKTCRLKGNLKKHIKTH
Links
Other
C2H2 ZF
family TFs
Other
Steinernema glaseri
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy