L898_g13372 (Steinernema monticolum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 L898_g13372 T154731_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bcl-11
M00641_2.00 		Caenorhabditis elegans
NNTGACCRNN
NNYGGTCANN		 PBM
Narasimhan et al.(2015)
pTH10807 		0.824 0.928
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L898_g13372.t1 C2H2 ZF 600 622
L898_g13372.t1 C2H2 ZF 628 650
L898_g13372.t1 C2H2 ZF 658 683
L898_g13372.t2 C2H2 ZF 596 618
L898_g13372.t2 C2H2 ZF 624 646
L898_g13372.t2 C2H2 ZF 654 679
L898_g13372.t3 C2H2 ZF 579 601
L898_g13372.t3 C2H2 ZF 607 629
L898_g13372.t3 C2H2 ZF 637 662

Links

Other C2H2 ZF family TFs
Other Steinernema monticolum TFs

Invalid Input OrderBy

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action